ggKbase home page

13_2_20cm_2_scaffold_5163

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5163_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)
D-aminopeptidase (EC:3.4.11.-)
D-aminopeptidase n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TUA3_BRELA
D-aminopeptidase Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5163_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(526..2412)
DNA (1887bp) protein (629aa)
aspartyl-tRNA(Asn) amidotransferase subunit B; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F5F48 rbh
glutamyl-tRNA(Gln) amidotransferase subunit E
13_2_20cm_2_scaffold_5163_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2438..2887)
DNA (450bp) protein (150aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_5163_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2997..3299
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5163_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3296..3757)
DNA (462bp) protein (154aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_5163_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3815..5119)
DNA (1305bp) protein (435aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RBG_16_Euryarchaeota_67_27_curated
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:3.5.1.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D4958
13_2_20cm_2_scaffold_5163_7
unknown

Not on your lists

comp(5566..5955)
DNA (390bp) protein (130aa)

This feature has no annotations

13_2_20cm_2_scaffold_5163_8
unknown

Not on your lists

comp(6173..6661)
DNA (489bp) protein (163aa)

This feature has no annotations

13_2_20cm_2_scaffold_5163_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6741..7022
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMR6_ACIS0
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_2_scaffold_5163_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7042..7977)
DNA (936bp) protein (312aa)
L-lactate dehydrogenase (EC:1.1.1.27); K00016 L-lactate dehydrogenase [EC:1.1.1.27] Tax=RBG_16_Euryarchaeota_67_27_curated
Malate dehydrogenase (NAD) n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1D5_9ARCH
malate dehydrogenase
13_2_20cm_2_scaffold_5163_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8047..9876)
DNA (1830bp) protein (610aa)
acyl-CoA dehydrogenase domain-containing protein; K00248 butyryl-CoA dehydrogenase [EC:1.3.8.1] Tax=RBG_16_Euryarchaeota_67_27_curated
Acyl-CoA dehydrogenase domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAA0_ANAD2
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_2_scaffold_5163_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9929..10834
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N2G4_9ACTO
GNAT family acetyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_5163_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10847..12421)
DNA (1575bp) protein (525aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EDE82
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_5163_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

12610..13086
DNA (477bp) protein (159aa)
peroxiredoxin (EC:1.11.1.15) Tax=RBG_16_Euryarchaeota_67_27_curated
Putative AhpC/TSA family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC37_9ZZZZ
homolog to peroxiredoxin
13_2_20cm_2_scaffold_5163_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(13067..14191)
DNA (1125bp) protein (375aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZU2_9CHLR
Threonine synthase {ECO:0000313|EMBL:EFH82082.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer
13_2_20cm_2_scaffold_5163_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14270..15097
DNA (828bp) protein (276aa)
TIGR00268 family protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9Y9_9CYAN
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_5163_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15128..15895)
DNA (768bp) protein (256aa)
metal cation transporter id=14631165 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin9_gal15 organism_group=GAL15
metal cation transporter Tax=CSP1_3_Armatimonadetes
putative Zinc transporter ZupT
13_2_20cm_2_scaffold_5163_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16009..16434)
DNA (426bp) protein (142aa)
Ferredoxin n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Q4_9ARCH
ferredoxin Tax=RBG_16_Euryarchaeota_67_27_curated
ferredoxin
13_2_20cm_2_scaffold_5163_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16626..17606
DNA (981bp) protein (327aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11] Tax=RBG_16_Euryarchaeota_67_27_curated
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-lyase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFW6_9BACT
13_2_20cm_2_scaffold_5163_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17744..23773)
DNA (6030bp) protein (2010aa)
Putative kinesin n=1 Tax=Leishmania major RepID=Q4QEL9_LEIMA
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
DnaJ domain-containing protein
13_2_20cm_2_scaffold_5163_21
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(23863..27081)
DNA (3219bp) protein (1073aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K827_BURCC
outer membrane autotransporter
Uncharacterized protein {ECO:0000313|EMBL:KKW13563.1}; Flags: Fragment;; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Displaying 21 items

View Taxonomy