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13_2_20cm_2_scaffold_521

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_521_1
unknown

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comp(2..355)
DNA (354bp) protein (118aa)

This feature has no annotations

13_2_20cm_2_scaffold_521_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(363..2780)
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A491_GEMAT
Phenylalanyl-tRNA synthetase beta chain
13_2_20cm_2_scaffold_521_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2777..3700)
DNA (924bp) protein (308aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SYFA_GEMAT
13_2_20cm_2_scaffold_521_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3703..4056)
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL20_GEMAT
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rplT; 50S ribosomal protein L20
13_2_20cm_2_scaffold_521_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4066..4260)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LW82_TEPAE
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RBG_16_Gemmatimonadetes_66_8_curated
50S ribosomal protein L35
13_2_20cm_2_scaffold_521_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4343..4831)
DNA (489bp) protein (163aa)
Translation initiation factor IF-3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A495_GEMAT
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
infC; translation initiation factor IF-3
13_2_20cm_2_scaffold_521_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5087..5950)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A496_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_2_20cm_2_scaffold_521_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5947..6777)
DNA (831bp) protein (277aa)
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III epsilon subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A497_GEMAT
13_2_20cm_2_scaffold_521_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6822..8057)
DNA (1236bp) protein (412aa)
arginine deiminase; K01478 arginine deiminase [EC:3.5.3.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Arginine deiminase id=3915302 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
arginine deiminase
13_2_20cm_2_scaffold_521_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8243..8863)
DNA (621bp) protein (207aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A498_GEMAT
redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor Tax=RBG_16_Gemmatimonadetes_66_8_curated
redox-sensing transcriptional repressor Rex
13_2_20cm_2_scaffold_521_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8877..9686)
DNA (810bp) protein (270aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1F9_9GAMM
Ribosomal RNA small subunit methyltransferase A
13_2_20cm_2_scaffold_521_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9683..11332)
DNA (1650bp) protein (550aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A0_GEMAT
putative phosphatase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein phosphatase 2C domain protein
13_2_20cm_2_scaffold_521_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11347..11805)
DNA (459bp) protein (153aa)
Response regulator receiver protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY3_DESB2
response regulator receiver protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver protein
13_2_20cm_2_scaffold_521_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11808..12143)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
anti-anti-sigma factor
13_2_20cm_2_scaffold_521_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12128..13063)
DNA (936bp) protein (312aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A3_GEMAT
13_2_20cm_2_scaffold_521_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13060..13557)
DNA (498bp) protein (166aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
13_2_20cm_2_scaffold_521_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13554..14072)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_521_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14174..15874)
DNA (1701bp) protein (567aa)
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
recJ; single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A6_GEMAT
13_2_20cm_2_scaffold_521_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15871..16575)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A7_GEMAT
hypothetical protein; K07164 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF164
13_2_20cm_2_scaffold_521_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16559..18343)
DNA (1785bp) protein (595aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA primase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A8_GEMAT
DNA primase
13_2_20cm_2_scaffold_521_21
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(18340..18516)
DNA (177bp) protein (59aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=276 species="Bacteria; Deinococ
Endonuclease MutS2 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9F0_THEAQ
DNA mismatch repair protein
Displaying 21 items

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