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13_2_20cm_2_scaffold_548

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_548_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_2
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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278..1714
DNA (1437bp) protein (479aa)
Transmembrane transporter n=2 Tax=Streptomyces RepID=V4ITA7_9ACTO
Transmembrane transporter {ECO:0000313|EMBL:ESQ03345.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Transmembrane transporter
13_2_20cm_2_scaffold_548_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1852..2202)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R956_PHEZH
NIPSNAP family protein {ECO:0000313|EMBL:ETX08470.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_2_20cm_2_scaffold_548_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2313..2636
DNA (324bp) protein (108aa)
CalR8 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08UB5_STIAD
ArsR family transcriptional regulator
CalR8 {ECO:0000313|EMBL:EAU64072.1}; Transcriptional regulator, ArsR domain protein {ECO:0000313|EMBL:ADO69132.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
13_2_20cm_2_scaffold_548_5
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2636..2956
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349424C
ATPase {ECO:0000313|EMBL:KIL41515.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
ATPase
13_2_20cm_2_scaffold_548_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3029..5002
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3T9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81177.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_2_20cm_2_scaffold_548_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..6478
DNA (1305bp) protein (435aa)
Tetracycline efflux transporter n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZDN3_9GAMM
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
tetA; tetracycline efflux transporter
13_2_20cm_2_scaffold_548_8
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(6533..7012)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C051A
Uncharacterized protein {ECO:0000313|EMBL:EQB67180.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
hypothetical protein
13_2_20cm_2_scaffold_548_9
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

7223..7618
DNA (396bp) protein (132aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=CG_Proteo_01
aspartate 1-decarboxylase (EC:4.1.1.11)
aspartate decarboxylase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003717CB6
13_2_20cm_2_scaffold_548_10
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

comp(7707..8384)
DNA (678bp) protein (226aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0J9_9CLOT
hypothetical protein; K06950 uncharacterized protein Tax=CG_Caldi_01
phosphohydrolase
13_2_20cm_2_scaffold_548_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8486..9283
DNA (798bp) protein (266aa)
putative haloacid dehalogenase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Archaea_50_20_curated
HAD family hydrolase id=7200297 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
HAD family hydrolase
13_2_20cm_2_scaffold_548_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9383..9970)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJY7_9DELT
Beta-lactamase superfamily domain
Beta-lactamase superfamily domain {ECO:0000313|EMBL:AHY46911.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
13_2_20cm_2_scaffold_548_13
unknown

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comp(10012..10209)
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_14
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10278..10901)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003715369
hypothetical protein Tax=CG_Anaero_02
Methyltransferase
13_2_20cm_2_scaffold_548_15
unknown

Not on your lists

10936..11676
DNA (741bp) protein (247aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(11686..12063)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX82_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_548_17
unknown

Not on your lists

comp(12114..12377)
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_18
unknown

Not on your lists

comp(12529..13023)
DNA (495bp) protein (165aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_19
unknown

Not on your lists

13239..13532
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13619..15076)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_2_20cm_2_scaffold_548_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15118..15420)
DNA (303bp) protein (101aa)
Translation initiation factor 1A n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4C5_9ARCH
translation initiation factor IF-1 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor eIF-1A
13_2_20cm_2_scaffold_548_22
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15495..16055)
DNA (561bp) protein (187aa)
Thioredoxin-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALY1_IGNAJ
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:AFH49988.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteri
13_2_20cm_2_scaffold_548_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16135..16842
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C505F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_2_20cm_2_scaffold_548_24
unknown

Not on your lists

comp(16924..17103)
DNA (180bp) protein (60aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_25

Not on your lists

comp(17368..17844)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
Marine sediment metagenome DNA, contig: S01H1_L06560 {ECO:0000313|EMBL:GAF78006.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
bcp-4; peroxiredoxin
13_2_20cm_2_scaffold_548_26
unknown

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comp(17983..18465)
DNA (483bp) protein (161aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(18619..19902)
DNA (1284bp) protein (428aa)
Citrate transporter n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ87_9ARCH rbh
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
arsB; arsenical pump membrane protein
13_2_20cm_2_scaffold_548_28
unknown

Not on your lists

comp(19988..20380)
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_29
unknown

Not on your lists

comp(20940..21263)
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_2_scaffold_548_30
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(21362..21889)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ANY9_THEM3
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
Displaying items 1-30 of 55 in total

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