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13_2_20cm_2_scaffold_587

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_587_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..553)
DNA (552bp) protein (184aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V0_GEMAT
Phosphatidylserine decarboxylase proenzyme
13_2_20cm_2_scaffold_587_2
unknown

Not on your lists

comp(544..675)
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_2_scaffold_587_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(672..1595)
DNA (924bp) protein (308aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U9_GEMAT
Phosphoribosylaminoimidazole-succinocarboxamide synthase
13_2_20cm_2_scaffold_587_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1592..2980)
DNA (1389bp) protein (463aa)
Adenylosuccinate lyase n=1 Tax=uncultured planctomycete RepID=H5SIH7_9BACT
adenylosuccinate lyase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
adenylosuccinate lyase
13_2_20cm_2_scaffold_587_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3022..3690)
DNA (669bp) protein (223aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=TAL_METJA
13_2_20cm_2_scaffold_587_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3694..4185)
DNA (492bp) protein (164aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT
tRNA pseudouridine synthase A
13_2_20cm_2_scaffold_587_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5029..5361
DNA (333bp) protein (111aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z4M7_9CLOT
Anthranilate phosphoribosyltransferase
13_2_20cm_2_scaffold_587_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5401..6009)
DNA (609bp) protein (203aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
LexA repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U3_GEMAT
LexA repressor
13_2_20cm_2_scaffold_587_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6068..6868
DNA (801bp) protein (267aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Indole-3-glycerol phosphate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H792_ANADF
Indole-3-glycerol phosphate synthase
13_2_20cm_2_scaffold_587_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7019..8221
DNA (1203bp) protein (401aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWC2_Gemmatimonadetes_71_10_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A955_GEMAT
13_2_20cm_2_scaffold_587_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8275..9894
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A954_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_587_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9891..11366
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_587_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11359..12126
DNA (768bp) protein (256aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_2_20cm_2_scaffold_587_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12150..14231
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C4P2_9BACT
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_2_20cm_2_scaffold_587_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14250..14696
DNA (447bp) protein (149aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; FolK n=3 Tax=Azotobacter vinelandii RepID=C1DFJ7_AZOVD
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_2_20cm_2_scaffold_587_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14689..15501
DNA (813bp) protein (271aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3R1_DESIS
13_2_20cm_2_scaffold_587_17

Not on your lists

15531..16763
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TR78_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKM82931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_2_20cm_2_scaffold_587_18
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16770..17639
DNA (870bp) protein (290aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SG80_THEM7
13_2_20cm_2_scaffold_587_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17755..18252
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_2_20cm_2_scaffold_587_20
unknown

Not on your lists

18252..18632
DNA (381bp) protein (127aa)

This feature has no annotations

13_2_20cm_2_scaffold_587_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18570..19634)
DNA (1065bp) protein (355aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT rbh
hypothetical protein
13_2_20cm_2_scaffold_587_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19713..20168
DNA (456bp) protein (152aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PTS IIA-like nitrogen-regulatory protein PtsN
Putative phosphotransferase system nitrogen regulatory IIA component id=2691641 bin=GWF2_Planctomycetes_42_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
13_2_20cm_2_scaffold_587_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


20222..21793
DNA (1572bp) protein (524aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_587_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21790..22746
DNA (957bp) protein (319aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_587_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22748..24922
DNA (2175bp) protein (725aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPX0_9FIRM rbh
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_587_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24879..25316
DNA (438bp) protein (146aa)
Endoribonuclease YbeY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_587_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25313..26506
DNA (1194bp) protein (398aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_2_20cm_2_scaffold_587_28
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

26503..27702
DNA (1200bp) protein (400aa)
CBS domain containing protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZP2_ACIFD
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:ACU54200.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" s
13_2_20cm_2_scaffold_587_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27731..29335
DNA (1605bp) protein (535aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
methylmalonyl-CoA mutase, large subunit
13_2_20cm_2_scaffold_587_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29370..30074
DNA (705bp) protein (235aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLC8_MARHT
methylmalonyl-CoA mutase, large subunit
Displaying items 1-30 of 33 in total

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