ggKbase home page

13_2_20cm_2_scaffold_631

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_631_1
unknown

Not on your lists

273..596
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

665..1648
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVB9_ACISM rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADW67294.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola
13_2_20cm_2_scaffold_631_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1750..2424
DNA (675bp) protein (225aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVL1_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF39089.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_2_scaffold_631_4
unknown

Not on your lists

comp(2454..3281)
DNA (828bp) protein (276aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_5
unknown

Not on your lists

comp(3344..3652)
DNA (309bp) protein (103aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3954..6191
DNA (2238bp) protein (746aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Cell wall hydrolase/autolysin id=2088261 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
N-acetylmuramoyl-L-alanine amidase
13_2_20cm_2_scaffold_631_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6207..8333)
DNA (2127bp) protein (709aa)
Peptidase S9, prolyl oligopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUN5_KORVE rbh
peptidase S9, prolyl oligopeptidase
Peptidase S9, prolyl oligopeptidase {ECO:0000313|EMBL:ABF39415.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_2_20cm_2_scaffold_631_8
unknown

Not on your lists

comp(8344..8946)
DNA (603bp) protein (201aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(8965..10089)
DNA (1125bp) protein (375aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_2_20cm_2_scaffold_631_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10270..10743)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037BD59C
Uncharacterized protein {ECO:0000313|EMBL:KGM34492.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
hypothetical protein
13_2_20cm_2_scaffold_631_11
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10790..12436)
DNA (1647bp) protein (549aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YNG2_BURA4
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AKC70939.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;
13_2_20cm_2_scaffold_631_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12873..13373)
DNA (501bp) protein (167aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDF9_DESAR
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETX03974.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp
13_2_20cm_2_scaffold_631_13
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13424..13612)
DNA (189bp) protein (63aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AEB10025.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AEB10025.1};; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales;
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDF9_DESAR
13_2_20cm_2_scaffold_631_14
unknown

Not on your lists

comp(13650..14699)
DNA (1050bp) protein (350aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_15
unknown

Not on your lists

comp(14704..15465)
DNA (762bp) protein (254aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15562..16383
DNA (822bp) protein (274aa)
GlcNAc-PI de-N-acetylase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038003EE
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ABJ87151.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_2_20cm_2_scaffold_631_17
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16455..17702)
DNA (1248bp) protein (416aa)
Sugar phosphate permease n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZE61_TERRK
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:AFL87529.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391
13_2_20cm_2_scaffold_631_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17881..18804
DNA (924bp) protein (308aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFL5_9BACT
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG93156.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_631_19
Acidobacteriaceae bacterium KBS 96, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18935..19540
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E4345
13_2_20cm_2_scaffold_631_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19564..21243
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371A1F8
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:CDM64608.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
glucose-methanol-choline oxidoreductase
13_2_20cm_2_scaffold_631_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(21507..22850)
DNA (1344bp) protein (448aa)
Oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T47_SOLUE
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87173.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_2_20cm_2_scaffold_631_22
unknown

Not on your lists

comp(22996..23361)
DNA (366bp) protein (122aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_23
unknown

Not on your lists

23384..23596
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_24
unknown

Not on your lists

24361..25836
DNA (1476bp) protein (492aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_25

Not on your lists

comp(26054..26398)
DNA (345bp) protein (115aa)
Reverse transcriptase/maturase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Y951_9ZZZZ
Reverse transcriptase/maturase {ECO:0000313|EMBL:EQD31696.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA-directed DNA polymerase
13_2_20cm_2_scaffold_631_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26440..27402)
DNA (963bp) protein (321aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026R3_SOLUE
RNA-directed DNA polymerase
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:ABJ83006.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_2_20cm_2_scaffold_631_27
Baudoinia compniacensis, Baudoinia, Capnodiales, Dothideomycetidae, Ascomycota, Fungi

Not on your lists

28166..29920
DNA (1755bp) protein (585aa)
acid phosphatase; K01078 acid phosphatase [EC:3.1.3.2]
Uncharacterized protein n=1 Tax=Baudoinia compniacensis (strain UAMH 10762) RepID=M2MS53_BAUCO
Uncharacterized protein {ECO:0000313|EMBL:EMC94333.1}; TaxID=717646 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Teratosphaeriaceae;
13_2_20cm_2_scaffold_631_28
unknown

Not on your lists

30024..30329
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_2_scaffold_631_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(30485..30652)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000379A96C
FmdB family regulatory protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_2_scaffold_631_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(30691..30879)
DNA (189bp) protein (63aa)
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ABJ84922.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sourc
Displaying items 1-30 of 31 in total

View Taxonomy