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13_2_20cm_2_scaffold_6353

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_6353_1
unknown

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comp(1..462)
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_2_scaffold_6353_2
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(492..1034)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWG0_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07235.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
hypothetical protein
13_2_20cm_2_scaffold_6353_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1161..1901)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUA1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39549.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_6353_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1898..2446)
DNA (549bp) protein (183aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D650_MYXXD
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_6353_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2625..3338)
DNA (714bp) protein (238aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVW5_HIPMA
signal peptidase I
13_2_20cm_2_scaffold_6353_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3338..4198)
DNA (861bp) protein (287aa)
WD40-like beta Propeller n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKW5_KORVE
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40-like beta Propeller containing protein
13_2_20cm_2_scaffold_6353_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4517..4843
DNA (327bp) protein (109aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_6353_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4840..6927
DNA (2088bp) protein (696aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT rbh
transketolase
13_2_20cm_2_scaffold_6353_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6948..8039)
DNA (1092bp) protein (364aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HemY2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
13_2_20cm_2_scaffold_6353_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8048..8962)
DNA (915bp) protein (305aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_2_20cm_2_scaffold_6353_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8952..9914)
DNA (963bp) protein (321aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_2_20cm_2_scaffold_6353_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9973..10932)
DNA (960bp) protein (320aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_2_20cm_2_scaffold_6353_13
unknown

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comp(11029..11193)
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_2_scaffold_6353_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11190..11378)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_6353_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11375..12175)
DNA (801bp) protein (267aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protoheme IX farnesyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
protoheme IX farnesyltransferase
13_2_20cm_2_scaffold_6353_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12214..12489)
DNA (276bp) protein (92aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase, subunit IV
13_2_20cm_2_scaffold_6353_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12502..13179)
DNA (678bp) protein (226aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome oxidase subunit III n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3081F
cytochrome c oxidase subunit III
13_2_20cm_2_scaffold_6353_18
CSP1_5_NC10, NC10, Bacteria

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comp(13201..14595)
DNA (1395bp) protein (465aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14429800 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=CSP1_5_NC10
cytochrome c oxidase subunit I (EC:1.9.3.1)
13_2_20cm_2_scaffold_6353_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14830..15501)
DNA (672bp) protein (224aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_2_20cm_2_scaffold_6353_20
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(15521..16165)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_2_20cm_2_scaffold_6353_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(16213..17748)
DNA (1536bp) protein (512aa)
putative cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical (Diheme) protein id=4488143 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative cytochrome c
Displaying 21 items

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