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13_2_20cm_2_scaffold_643

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_643_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..1296)
DNA (1296bp) protein (432aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Euryarchaeota_68_13_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D31F3
13_2_20cm_2_scaffold_643_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1293..1499)
DNA (207bp) protein (69aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Euryarchaeota_68_13_curated
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanyl-tRNA synthetase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A755_9ZZZZ
13_2_20cm_2_scaffold_643_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(1573..2457)
DNA (885bp) protein (295aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10) Tax=RBG_16_Euryarchaeota_67_27_curated
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10) id=14430914 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
13_2_20cm_2_scaffold_643_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2624..3178)
DNA (555bp) protein (185aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_643_5
unknown

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comp(3454..3684)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_2_scaffold_643_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3830..4345
DNA (516bp) protein (172aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Euryarchaeota_67_27_curated
Acetyl-CoA acetyltransferase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2U8_FERPA
acetyl-CoA acetyltransferase
13_2_20cm_2_scaffold_643_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4342..5505
DNA (1164bp) protein (388aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Euryarchaeota_67_27_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS00_9BACT rbh
acetyl-CoA acetyltransferase
13_2_20cm_2_scaffold_643_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5502..6023
DNA (522bp) protein (174aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BD85_9EURY
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_2_20cm_2_scaffold_643_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6020..6496
DNA (477bp) protein (159aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SHD5_9BACT
hypothetical protein; K07068 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_2_scaffold_643_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6569..7117
DNA (549bp) protein (183aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
small GTP-binding protein
13_2_20cm_2_scaffold_643_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7170..8846
DNA (1677bp) protein (559aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, N-terminal domain (Fragment) n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SIE1_9CHLR
13_2_20cm_2_scaffold_643_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8848..9255
DNA (408bp) protein (136aa)
cobalamin b12-binding domain protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Methylmalonyl-CoA mutase family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T3V4_9EURY
cobalamin b12-binding domain protein
13_2_20cm_2_scaffold_643_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9293..10240
DNA (948bp) protein (316aa)
argK2; lysine arginine ornithine transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein id=14631972 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
lysine/arginine/ornithine transport system kinase
13_2_20cm_2_scaffold_643_trna_1
unknown

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comp(10248..10322)
DNA (75bp)
transferRNA
13_2_20cm_2_scaffold_643_14
unknown

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10506..11960
DNA (1455bp) protein (485aa)

This feature has no annotations

13_2_20cm_2_scaffold_643_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11981..12856)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374592B
peptidylprolyl isomerase FKBP-type Tax=RBG_16_Euryarchaeota_67_27_curated
peptidylprolyl isomerase FKBP-type
13_2_20cm_2_scaffold_643_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12964..13878)
DNA (915bp) protein (305aa)
Transcription initiation factor IIB n=2 Tax=Euryarchaeota RepID=M9SBD1_9EURY
Transcription initiation factor B Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Transcription initiation factor B
13_2_20cm_2_scaffold_643_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14017..14745)
DNA (729bp) protein (243aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_643_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14756..15247)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LDU6_9BACT
hypothetical protein; K09129 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_643_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

15351..15665
DNA (315bp) protein (105aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_643_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15668..16105)
DNA (438bp) protein (146aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_643_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

16340..18454
DNA (2115bp) protein (705aa)
Psa; puromycin sensitive aminopeptidase; K08776 puromycin-sensitive aminopeptidase [EC:3.4.11.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037885FD
aminopeptidase N
Displaying 22 items

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