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13_2_20cm_2_scaffold_6465

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_6465_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Holo-[acyl-carrier-protein] synthase id=1996523 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acpS; 4'-phosphopantetheinyl transferase
13_2_20cm_2_scaffold_6465_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(420..1976)
DNA (1557bp) protein (519aa)
Radical SAM n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFQ0_ANADE
Fe-S oxidoreductase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
radical SAM family protein
13_2_20cm_2_scaffold_6465_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2260..3438)
DNA (1179bp) protein (393aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Cell division protein FtsZ id=4561326 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
cell division protein FtsZ
13_2_20cm_2_scaffold_6465_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3525..4757)
DNA (1233bp) protein (411aa)
Cell division protein ftsA n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8J5_GEOUR
ftsA; cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
cell division protein FtsA
13_2_20cm_2_scaffold_6465_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4772..5641)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000379D3FC
cell division septal protein FtsQ; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
13_2_20cm_2_scaffold_6465_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5602..6525)
DNA (924bp) protein (308aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DRQ1_9BACL
13_2_20cm_2_scaffold_6465_7
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6534..7802)
DNA (1269bp) protein (423aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; Ta
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=MURC_DESAA
UDP-N-acetylmuramate--L-alanine ligase
13_2_20cm_2_scaffold_6465_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..8910)
DNA (993bp) protein (331aa)
murG; UDP-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophospho
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=MURG_GEOSL
UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
13_2_20cm_2_scaffold_6465_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..10115)
DNA (1209bp) protein (403aa)
cell cycle protein FtsW Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Cell division protein FtsW id=2130606 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cell cycle protein, ftsw/roda/spove family
13_2_20cm_2_scaffold_6465_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10112..11446)
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=2130611 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_2_20cm_2_scaffold_6465_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11446..12522)
DNA (1077bp) protein (359aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=2130614 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
13_2_20cm_2_scaffold_6465_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12522..13838)
DNA (1317bp) protein (439aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobac
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Geobacter metallireducens RepID=Q39YM3_GEOMG
murF; UDP-N-acetylmuramylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
13_2_20cm_2_scaffold_6465_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13835..15340)
DNA (1506bp) protein (502aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH62_ANADF
UDP-N-acetylmuramyl tripeptide synthetase
13_2_20cm_2_scaffold_6465_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15340..17166)
DNA (1827bp) protein (609aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Peptidoglycan transglycosylase and transpeptidase FtsI id=2130655 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
13_2_20cm_2_scaffold_6465_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17163..17525)
DNA (363bp) protein (121aa)
cell division protein FtsL Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Cell division protein FtsL id=2130657 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_6465_16
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(17522..18532)
DNA (1011bp) protein (337aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RBG_13_Chloroflexi_68_17_curated
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYM1_ANATU rbh
13_2_20cm_2_scaffold_6465_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18577..19056)
DNA (480bp) protein (160aa)
cell division protein MraZ Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Protein MraZ id=2130662 bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mraZ; cell division protein MraZ
13_2_20cm_2_scaffold_6465_18
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(19828..20553)
DNA (726bp) protein (242aa)
hypothetical protein; K07164 Tax=RBG_16_Acidobacteria_68_9_curated
Putative uncharacterized protein id=2130666 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_2_20cm_2_scaffold_6465_trna_1
unknown

Not on your lists

comp(20607..20680)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_6465_19
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20737..21549)
DNA (813bp) protein (271aa)
RNA polymerase sigma factor RpoD n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091D4_STIAD
rpoD; RNA polymerase sigma factor rpod
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cysto
Displaying 20 items

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