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13_2_20cm_2_scaffold_6537

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_6537_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..492
DNA (492bp) protein (164aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
13_2_20cm_2_scaffold_6537_2
unknown

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647..1807
DNA (1161bp) protein (387aa)

This feature has no annotations

13_2_20cm_2_scaffold_6537_3
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1885..2250
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WW63_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23441.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
13_2_20cm_2_scaffold_6537_4
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2263..3771)
DNA (1509bp) protein (503aa)
Uncharacterized protein {ECO:0000313|EMBL:KIH75866.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibac
hypothetical protein id=24398918 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_2_20cm_2_scaffold_6537_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3797..4513)
DNA (717bp) protein (239aa)
Methyltransferase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPA3_SINAD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGA30501.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisp
13_2_20cm_2_scaffold_6537_6
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4521..5483)
DNA (963bp) protein (321aa)
Glycosyl transferase family 2 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHH0_ROSCS
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABU56917.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
13_2_20cm_2_scaffold_6537_7
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(5480..7669)
DNA (2190bp) protein (730aa)
methyltransferase type 11 Tax=RBG_13_RIF_OD1_08_37_53_curated
13_2_20cm_2_scaffold_6537_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7693..7911
DNA (219bp) protein (73aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_6537_9
unknown

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7908..8387
DNA (480bp) protein (160aa)

This feature has no annotations

13_2_20cm_2_scaffold_6537_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8435..8932
DNA (498bp) protein (166aa)
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_6537_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8929..9324
DNA (396bp) protein (132aa)
hypothetical protein; K08972 putative membrane protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein; K08972 putative membrane protein id=14431488 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_6537_12
RLO_PLX_64_10, Bacteria

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9324..9692
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7C1_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_2_20cm_2_scaffold_6537_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10752..11162
DNA (411bp) protein (137aa)
Peptidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095K6_STIAD
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AHG89605.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_6537_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11174..12304
DNA (1131bp) protein (377aa)
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative serine dehydratase domain protein
13_2_20cm_2_scaffold_6537_15
unknown

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12301..12705
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_2_scaffold_6537_16
unknown

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12702..12998
DNA (297bp) protein (99aa)

This feature has no annotations

13_2_20cm_2_scaffold_6537_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12995..13438
DNA (444bp) protein (148aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=2637582 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_2_20cm_2_scaffold_6537_18
unknown

Not on your lists

comp(13478..14650)
DNA (1173bp) protein (391aa)

This feature has no annotations

13_2_20cm_2_scaffold_6537_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14647..15126)
DNA (480bp) protein (160aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48647.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
13_2_20cm_2_scaffold_6537_20
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15200..15778)
DNA (579bp) protein (193aa)
Glycan metabolism protein {ECO:0000313|EMBL:AIZ65479.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
RagB/SusD domain-containing protein id=4481095 bin=GWF2_Bacteroidetes_42_66 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
RagB/SusD domain-containing protein
13_2_20cm_2_scaffold_6537_21
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15726..16601)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DC66A6
RagB/SusD domain protein
RagB/SusD family protein Tax=GWF2_Bacteroidetes_49_14_curated
13_2_20cm_2_scaffold_6537_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16609..17502)
DNA (894bp) protein (298aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDT4_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor
Displaying 22 items

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