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13_2_20cm_2_scaffold_7234

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_7234_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1203)
DNA (1203bp) protein (401aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_2_20cm_2_scaffold_7234_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1526..2557
DNA (1032bp) protein (344aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
2-dehydropantoate 2-reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL16_9RHIZ
2-dehydropantoate 2-reductase
13_2_20cm_2_scaffold_7234_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2554..3345
DNA (792bp) protein (264aa)
Peptidase M28 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8L9_SPHTD
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ACZ40162.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_2_20cm_2_scaffold_7234_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3342..4151
DNA (810bp) protein (270aa)
Peptidase M28 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8L9_SPHTD
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ACZ40162.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaero
13_2_20cm_2_scaffold_7234_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

4183..5778
DNA (1596bp) protein (532aa)
Extracellular solute-binding protein family 5 n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RII3_HALHG
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
family 5 extracellular solute-binding protein
13_2_20cm_2_scaffold_7234_6
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6063..6434)
DNA (372bp) protein (124aa)
Tax=RBG_16_Armatimonadetes_67_12_curated
13_2_20cm_2_scaffold_7234_7
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

6657..7523
DNA (867bp) protein (289aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BZE6_ANAMD
dipeptide/oligopeptide/nickel ABC transporter permease Tax=RBG_16_Armatimonadetes_67_12_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_2_20cm_2_scaffold_7234_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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7526..8302
DNA (777bp) protein (259aa)
dehydrogenase id=24545538 bin=RBG_19FT_COMBO_GAL15_69_19 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dehydrogenase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
short-chain dehydrogenase
13_2_20cm_2_scaffold_7234_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8440..8943
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=4827669 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_2_scaffold_7234_10
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8980..9336
DNA (357bp) protein (119aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4H6L4_9GAMM
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:ESP93136.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pse
endoribonuclease L-PSP
13_2_20cm_2_scaffold_7234_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9362..10459
DNA (1098bp) protein (366aa)
alcohol dehydrogenase class III; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase class III id=2304937 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase class III
13_2_20cm_2_scaffold_7234_12
unknown

Not on your lists

comp(10554..10916)
DNA (363bp) protein (121aa)

This feature has no annotations

13_2_20cm_2_scaffold_7234_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11043..11699)
DNA (657bp) protein (219aa)
hydrolase n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00037D8A49
HAD-superfamily hydrolase, subfamily IA, variant 3
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AHG88772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_7234_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11714..12661)
DNA (948bp) protein (316aa)
Enoyl-CoA hydratase/isomerase id=4793456 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase Tax=GWA2_Rokubacteria_73_35_curated
enoyl-CoA hydratase
13_2_20cm_2_scaffold_7234_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12658..13566)
DNA (909bp) protein (303aa)
Dehydrogenase (Modular protein) id=3428787 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
short chain dehydrogenase
13_2_20cm_2_scaffold_7234_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13746..14612
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q8H3_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_2_scaffold_7234_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14623..15654)
DNA (1032bp) protein (344aa)
dppF3; ABC transporter ATPase (EC:3.6.3.23)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D6503
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
13_2_20cm_2_scaffold_7234_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15664..16653)
DNA (990bp) protein (330aa)
Oligopeptide ABC transporter ATP-binding protein id=4621968 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX08071.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheo
oligopeptide/dipeptide ABC transporter ATPase
13_2_20cm_2_scaffold_7234_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16650..18302)
DNA (1653bp) protein (551aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SFQ5_9BURK rbh
Binding-protein dependent transport system inner membrane protein {ECO:0000313|EMBL:EHP38627.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
h16_A2951; ABC transporter permease
13_2_20cm_2_scaffold_7234_20
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18324..19574)
DNA (1251bp) protein (417aa)
Extracellular solute-binding protein family 5 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4Y2_OCEP5
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
family 5 extracellular solute-binding protein
Displaying 20 items

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