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13_2_20cm_2_scaffold_811

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_811_1
unknown

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2..187
DNA (186bp) protein (62aa)

This feature has no annotations

13_2_20cm_2_scaffold_811_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(199..708)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU7_9CREN
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_2_20cm_2_scaffold_811_3
RBG_16_Archaea_50_20_curated, Archaea

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841..1926
DNA (1086bp) protein (362aa)
Peptidase M50 n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A403_NITMS
peptidase M50 Tax=RBG_16_Archaea_50_20_curated
peptidase M50
13_2_20cm_2_scaffold_811_4
RBG_16_Archaea_50_20_curated, Archaea

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1907..2629
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N922_9ARCH
Restriction endonuclease family protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_811_5
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2629..3495
DNA (867bp) protein (289aa)
3-hydroxybutyryl-CoA dehydrogenase; EC=1.1.1.157;; Beta-hydroxybutyryl-CoA dehydrogenase; Short=BHBD;; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacte
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=HBD_THETC
3-hydroxyacyl-CoA dehydrogenase
13_2_20cm_2_scaffold_811_6
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3485..4138
DNA (654bp) protein (218aa)
Dimethylamine corrinoid protein MtbC n=2 Tax=Desulfotignum phosphitoxidans RepID=S0FSB2_9DELT
Dimethylamine corrinoid protein MtbC {ECO:0000313|EMBL:EMS77973.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source
mtbC; dimethylamine corrinoid protein
13_2_20cm_2_scaffold_811_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4140..4700)
DNA (561bp) protein (187aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_2_20cm_2_scaffold_811_8
unknown

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4935..5804
DNA (870bp) protein (290aa)

This feature has no annotations

13_2_20cm_2_scaffold_811_9
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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5808..8606
DNA (2799bp) protein (933aa)
AAA ATPase (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ADN49467.1}; EC=3.6.4.3 {ECO:0000313|EMBL:ADN49467.1};; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteace
AAA family ATPase, CDC48 subfamily n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QRU2_VULDI
13_2_20cm_2_scaffold_811_10

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8707..10191
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035F9E9B
Marine sediment metagenome DNA, contig: S01H1_L04025 {ECO:0000313|EMBL:GAF79609.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_2_20cm_2_scaffold_811_11
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(10239..10766)
DNA (528bp) protein (176aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=930
GMP synthase [glutamine-hydrolyzing] subunit A n=3 Tax=Sulfolobus RepID=GUAAA_SULSO
GMP synthase small subunit
13_2_20cm_2_scaffold_811_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(10839..12047)
DNA (1209bp) protein (403aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Bathyarchaeota_38_9_curated
GMP synthase domain protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B9N9_ACIHW rbh
GMP synthase
13_2_20cm_2_scaffold_811_13
unknown

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comp(12148..12543)
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_2_scaffold_811_14
RBG_16_Archaea_50_20_curated, Archaea

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12624..14237
DNA (1614bp) protein (538aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=RBG_16_Archaea_50_20_curated
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2F7_9ARCH
13_2_20cm_2_scaffold_811_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14406..14585
DNA (180bp) protein (60aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EEC89706.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EEC89706.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales
13_2_20cm_2_scaffold_811_trna_1
unknown

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comp(14599..14674)
DNA (76bp)
transferRNA
13_2_20cm_2_scaffold_811_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(15054..16181)
DNA (1128bp) protein (376aa)
citA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP34_9CHLR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer
13_2_20cm_2_scaffold_811_17
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

16296..17327
DNA (1032bp) protein (344aa)
isocitrate dehydrogenase (EC:1.1.1.41 1.1.1.42)
3-isopropylmalate dehydrogenase n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVJ8_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EFD92738.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
13_2_20cm_2_scaffold_811_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17331..19331)
DNA (2001bp) protein (667aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RBG_13_Bathyarchaeota_38_9_curated
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EGS0_PYRF1
13_2_20cm_2_scaffold_811_19
Listeria riparia, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19422..20273
DNA (852bp) protein (284aa)
Membrane protein, putative n=3 Tax=Listeria seeligeri RepID=D3UR88_LISSS
permease
Uncharacterized protein {ECO:0000313|EMBL:EUJ44649.1}; TaxID=1265816 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria riparia FSL S10-1204.;"
13_2_20cm_2_scaffold_811_20
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20280..20618
DNA (339bp) protein (113aa)
Predicted membrane protein n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9M252_PAEPP
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:GAC41183.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 1470
13_2_20cm_2_scaffold_811_21
unknown

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20633..21268
DNA (636bp) protein (212aa)

This feature has no annotations

13_2_20cm_2_scaffold_811_22
unknown

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comp(21216..21455)
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_2_scaffold_811_23
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(21905..22678)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S673_METSF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC70337.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococ
Displaying 24 items

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