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13_2_20cm_2_scaffold_8574

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_8574_1
unknown

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1..87
DNA (87bp) protein (29aa)

This feature has no annotations

13_2_20cm_2_scaffold_8574_2
unknown

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39..371
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_2_scaffold_8574_3
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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313..714
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C4283
Uncharacterized protein {ECO:0000313|EMBL:AJE38984.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_2_scaffold_8574_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(711..2798)
DNA (2088bp) protein (696aa)
Translation elongation factor G n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GI56_9FIRM
fusA; translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
translation elongation factor EF-G
13_2_20cm_2_scaffold_8574_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2843..3586
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Probable transcriptional regulatory protein Rxyl_1318 id=3257115 bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_2_20cm_2_scaffold_8574_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3624..4085
DNA (462bp) protein (154aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000376D863
ruvC; Holliday junction resolvase
13_2_20cm_2_scaffold_8574_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4988..6205
DNA (1218bp) protein (406aa)
NusA antitermination factor n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NID3_ROSCS
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NusA antitermination factor
13_2_20cm_2_scaffold_8574_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6150..6506
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJR7_THEM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU51130.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
13_2_20cm_2_scaffold_8574_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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6523..8403
DNA (1881bp) protein (627aa)
Translation initiation factor IF-2 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E153_9FIRM
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
translation initiation factor IF-2
13_2_20cm_2_scaffold_8574_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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8407..8763
DNA (357bp) protein (119aa)
Ribosome-binding factor A (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6Q4L5_9ZZZZ
rbfA; ribosome-binding factor A Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribosome-binding factor A
13_2_20cm_2_scaffold_8574_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8760..9737
DNA (978bp) protein (326aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=14629003 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
phosphoesterase RecJ domain-containing protein
13_2_20cm_2_scaffold_8574_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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9801..10403
DNA (603bp) protein (201aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tRNA pseudouridine synthase B n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3B3_FRADG
tRNA pseudouridine synthase B
13_2_20cm_2_scaffold_8574_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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10403..11896
DNA (1494bp) protein (498aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
transmembrane_regions 168..185 id=41914 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
13_2_20cm_2_scaffold_8574_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11948..12820
DNA (873bp) protein (291aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
FMN adenylyltransferase; riboflavin kinase (EC:2.7.1.26 2.7.7.2)
FMN adenylyltransferase riboflavin kinase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJS4_THEM7
13_2_20cm_2_scaffold_8574_15
unknown

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12817..13407
DNA (591bp) protein (197aa)

This feature has no annotations

13_2_20cm_2_scaffold_8574_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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13421..14275
DNA (855bp) protein (285aa)
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Bll1368 protein id=1837252 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NHL repeat family protein
13_2_20cm_2_scaffold_8574_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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14520..15407
DNA (888bp) protein (296aa)
Luciferase-like monooxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QKK4_CATAD
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACU77103.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
13_2_20cm_2_scaffold_8574_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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15471..15743
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Clostridium sp. CAG:245 RepID=R6BJH1_9CLOT
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S15
13_2_20cm_2_scaffold_8574_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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15818..16867
DNA (1050bp) protein (350aa)
pnp; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ED76_9CHLR
Displaying 19 items

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