ggKbase home page

13_2_20cm_2_scaffold_8790

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_8790_1
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

418..789
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YX18_9MICC
Cupin {ECO:0000313|EMBL:KII26746.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
cupin domain-containing protein
13_2_20cm_2_scaffold_8790_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1082..2611)
DNA (1530bp) protein (510aa)
Conserved domain protein id=4195223 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
adenylyl cyclase
13_2_20cm_2_scaffold_8790_3
unknown

Not on your lists

comp(2554..3252)
DNA (699bp) protein (233aa)

This feature has no annotations

13_2_20cm_2_scaffold_8790_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

3276..4133
DNA (858bp) protein (286aa)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_2_20cm_2_scaffold_8790_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4303..4761
DNA (459bp) protein (153aa)
Protein containing DUF1214 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZI21_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EWM17973.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_2_20cm_2_scaffold_8790_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4763..5224
DNA (462bp) protein (154aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Y317_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EWM17972.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_2_20cm_2_scaffold_8790_7
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5466..5903)
DNA (438bp) protein (146aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U
InterPro: Pyridoxal-5-phosphate-dependent enzymes beta family n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MMC6_BDEBA
hypothetical protein
13_2_20cm_2_scaffold_8790_8
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(5914..6501)
DNA (588bp) protein (196aa)
YceI family protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2P4_THEBD
hypothetical protein Tax=RBG_16_Actinobacteria_68_21_curated
hypothetical protein
13_2_20cm_2_scaffold_8790_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6598..7056
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248C6AC
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEA26567.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
13_2_20cm_2_scaffold_8790_10
unknown

Not on your lists

comp(7168..7683)
DNA (516bp) protein (172aa)

This feature has no annotations

13_2_20cm_2_scaffold_8790_11
unknown

Not on your lists

7800..8531
DNA (732bp) protein (244aa)

This feature has no annotations

13_2_20cm_2_scaffold_8790_12
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8551..9093
DNA (543bp) protein (181aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RPM5_MYCRN
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEV72588.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
13_2_20cm_2_scaffold_8790_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9090..9764
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000380B58B
Iron sulfur protein {ECO:0000313|EMBL:EWM11921.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
rieske (2Fe-2S) domain-containing protein
13_2_20cm_2_scaffold_8790_14
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9798..10223
DNA (426bp) protein (142aa)
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EOD66772.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis
13_2_20cm_2_scaffold_8790_15
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10264..10794
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S9YX14_STRA9
Uncharacterized protein {ECO:0000313|EMBL:KJS62629.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
13_2_20cm_2_scaffold_8790_16
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10797..11282
DNA (486bp) protein (162aa)
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:CDO26916.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageri
13_2_20cm_2_scaffold_8790_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11297..12544
DNA (1248bp) protein (416aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG25_9CHLR
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EFH88727.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kt
haloperoxidase
13_2_20cm_2_scaffold_8790_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12623..13450)
DNA (828bp) protein (276aa)
short-chain dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA465
oxidoreductase Tax=RBG_16_Chloroflexi_68_14_curated
Ketoacyl reductase hetN
13_2_20cm_2_scaffold_8790_19
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

13562..14047
DNA (486bp) protein (162aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=D9UDI5_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
hypothetical protein
13_2_20cm_2_scaffold_8790_20
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14501..14977
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIX8_MEISD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH65134.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus sil
13_2_20cm_2_scaffold_8790_21
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15801
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LG16_HALO1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY14618.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriacea
13_2_20cm_2_scaffold_8790_22
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15856..16323
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000360E2E1
hypothetical protein
Nitroreductase {ECO:0000313|EMBL:KDE97766.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM
13_2_20cm_2_scaffold_8790_23
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16348..17826
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037629AD
MFS transporter {ECO:0000313|EMBL:KJK57748.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
transmembrane efflux protein
13_2_20cm_2_scaffold_8790_24
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17857..18120
DNA (264bp) protein (88aa)
glyoxalase n=1 Tax=Streptomyces vitaminophilus RepID=UPI00036D70CD
Putative lyase {ECO:0000313|EMBL:EGJ78486.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
Lyase
Displaying 24 items

View Taxonomy