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13_2_20cm_2_scaffold_16776

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_16776_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

3..272
DNA (270bp) protein (90aa)
Uncharacterized protein id=4608604 bin=GWF2_Lentisphaerae_57_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein; K09147 hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
13_2_20cm_2_scaffold_16776_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

289..885
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036DF36D
Uncharacterized protein {ECO:0000313|EMBL:EFH82135.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_2_20cm_2_scaffold_16776_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1713..1979
DNA (267bp) protein (89aa)
Cro/Cl family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037C88F1
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
XRE family transcriptional regulator
13_2_20cm_2_scaffold_16776_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2076..2945
DNA (870bp) protein (290aa)
topA; DNA topoisomerase I (EC:5.99.1.2) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
13_2_20cm_2_scaffold_16776_5
unknown

Not on your lists

2954..3532
DNA (579bp) protein (193aa)

This feature has no annotations

13_2_20cm_2_scaffold_16776_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3376..3873)
DNA (498bp) protein (166aa)
SsrA-binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7F3_9BACT
smpB; ssrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
smpB; ssrA-binding protein
13_2_20cm_2_scaffold_16776_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4561..5409
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_16776_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5411..6991
DNA (1581bp) protein (527aa)
Virulence factor MviN homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P907_9BACT
mviN; virulence factor MviN-like protein; K03980 virulence factor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mviN; virulence factor MviN-like protein
13_2_20cm_2_scaffold_16776_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7129..7737
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8L6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43848.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_16776_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8160..8606
DNA (447bp) protein (149aa)
dtd; d-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dtd; d-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P905_9BACT
13_2_20cm_2_scaffold_16776_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8642..9223
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P904_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_2_20cm_2_scaffold_16776_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9265..10206)
DNA (942bp) protein (314aa)
putative peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:CBK43981.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospi
Putative Peptidylprolyl isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z9_9BACT
13_2_20cm_2_scaffold_16776_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10224..11138)
DNA (915bp) protein (305aa)
putative peptidylprolyl isomerase, PpiC-type (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidylprolyl isomerase
Foldase protein PrsA 1, putative id=2315295 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
13_2_20cm_2_scaffold_16776_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11161..11682)
DNA (522bp) protein (174aa)
mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z7_9BACT
13_2_20cm_2_scaffold_16776_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11730..14351)
DNA (2622bp) protein (874aa)
mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z7_9BACT
13_2_20cm_2_scaffold_16776_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14351..14827)
DNA (477bp) protein (159aa)
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-)
D-beta-D-heptose 1-phosphate adenosyltransferase {ECO:0000313|EMBL:CBK43978.1}; EC=2.7.7.- {ECO:0000313|EMBL:CBK43978.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; N
D-beta-D-heptose 1-phosphate adenosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8Z6_9BACT
13_2_20cm_2_scaffold_16776_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14882..16123)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYV0_METPS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_16776_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

16202..17506
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA65_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_2_20cm_2_scaffold_16776_19
unknown

Not on your lists

17517..17690
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_2_scaffold_16776_20
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

17704..18525
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKP8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ91074.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211
13_2_20cm_2_scaffold_16776_21
Nitrospina sp. AB-629-B18, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(18594..19784)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036F698D rbh
13_2_20cm_2_scaffold_16776_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19909..20457
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGU9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 22 items

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