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13_2_20cm_2_scaffold_4767

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4767_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(80..1381)
DNA (1302bp) protein (434aa)
Putative Radical SAM protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9N3_9BACT
putative radical SAM protein
Putative Radical SAM protein {ECO:0000313|EMBL:CBK39942.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_4767_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1345..1833)
DNA (489bp) protein (163aa)
Putative Radical SAM protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9N3_9BACT
putative radical SAM protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative radical SAM protein
13_2_20cm_2_scaffold_4767_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1965..2477)
DNA (513bp) protein (171aa)
Cytochrome 579 n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XWS8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_4767_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2489..3283)
DNA (795bp) protein (265aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEZ9_9BACT
13_2_20cm_2_scaffold_4767_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3390..3578
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_2_20cm_2_scaffold_4767_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(3597..4142)
DNA (546bp) protein (182aa)
Putative sensor with HAMP domain id=2205415 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
sensor with HAMP domain Tax=GWB2_Nitrospirae_47_37_curated
PAS/PAC sensor protein
13_2_20cm_2_scaffold_4767_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4172..4966)
DNA (795bp) protein (265aa)
Putative Response regulator, CheY-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8C3_9BACT
putative CheY-like response regulator
Putative Response regulator, CheY-like {ECO:0000313|EMBL:CBK43755.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;
13_2_20cm_2_scaffold_4767_8
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5109..5606)
DNA (498bp) protein (166aa)
PilZ domain-containing protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NKC3_DESSD
PilZ domain-containing protein
PilZ domain-containing protein {ECO:0000313|EMBL:AGF80029.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfo
13_2_20cm_2_scaffold_4767_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5657..7930)
DNA (2274bp) protein (758aa)
gspE2; general secretion pathway protein E Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
General secretion pathway protein E, contains GAF domain id=2045751 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspE2; general secretion pathway protein E
13_2_20cm_2_scaffold_4767_trna_1
unknown

Not on your lists

comp(8185..8258)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_4767_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8305..8706)
DNA (402bp) protein (134aa)
putative methyltransferase (EC:2.1.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative methyltransferase (EC:2.1.1.-)
Putative Methyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8S2_9BACT
Displaying 11 items

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