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13_2_20cm_2_scaffold_1407

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1407_trna_1
unknown

Not on your lists

comp(1..68)
DNA (68bp)
transferRNA
13_2_20cm_2_scaffold_1407_1
unknown

Not on your lists

comp(250..456)
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_2_scaffold_1407_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(789..2471)
DNA (1683bp) protein (561aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde ferredoxin oxidoreductase id=14626252 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_1407_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2468..5467)
DNA (3000bp) protein (1000aa)
Lytic transglycosylase id=3789302 bin=GWA2_Methylomirabilis_73_35 species=Danio rerio genus=Danio taxon_order=Cypriniformes taxon_class=Actinopterygii phylum=Chordata tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nrfG; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
outer membrane assembly lipoprotein YfiO
13_2_20cm_2_scaffold_1407_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5464..6846)
DNA (1383bp) protein (461aa)
Outer membrane assembly lipoprotein YfiO id=3789304 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
outer membrane assembly lipoprotein YfiO Tax=GWA2_Rokubacteria_73_35_curated
lytic transglycosylase domain-containing protein
13_2_20cm_2_scaffold_1407_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6888..7643
DNA (756bp) protein (252aa)
phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3789308 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_1407_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7640..9001
DNA (1362bp) protein (454aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain id=4329549 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
13_2_20cm_2_scaffold_1407_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9004..9444
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3979826 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_1407_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9450..10574
DNA (1125bp) protein (375aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14626264 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
13_2_20cm_2_scaffold_1407_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11616..12182)
DNA (567bp) protein (189aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=3979808 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_1407_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12331..13302
DNA (972bp) protein (324aa)
Extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Extracellular solute-binding protein id=3979806 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_2_scaffold_1407_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13280..13492)
DNA (213bp) protein (71aa)
maf protein; K06287 septum formation protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MAF protein id=3979804 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maf protein
13_2_20cm_2_scaffold_1407_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13884..14150)
DNA (267bp) protein (89aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3979802 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_1407_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14163..15083)
DNA (921bp) protein (307aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16) id=14626269 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
13_2_20cm_2_scaffold_1407_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15080..15475)
DNA (396bp) protein (132aa)
S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S-adenosylmethionine decarboxylase proenzyme id=3979797 bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_1407_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15830..16573
DNA (744bp) protein (248aa)
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] id=14626272 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
agmatinase (EC:3.5.3.11)
Displaying 16 items

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