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13_2_20cm_2_scaffold_177

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_177_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..305)
DNA (303bp) protein (101aa)
glutamine-fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamine-fructose-6-phosphate transaminase (Isomerizing) id=1866170 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_177_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(321..1118)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWA2_Rokubacteria_73_35_curated
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVX5_ALIDB rbh
enoyl-CoA hydratase/isomerase
13_2_20cm_2_scaffold_177_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1115..2278)
DNA (1164bp) protein (388aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Arabinose efflux permease family protein id=1866162 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces pristinaespiralis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
13_2_20cm_2_scaffold_177_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2289..3071
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F324_9DELT
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
3-hydroxyacyl-CoA dehydrogenase
13_2_20cm_2_scaffold_177_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3110..4123
DNA (1014bp) protein (338aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methionine synthase (B12-independent) id=1866156 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
vitamin-B12 independent methionine synthase
13_2_20cm_2_scaffold_177_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4120..4854
DNA (735bp) protein (245aa)
conserved hypothetical protein; putative signal peptide Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1866153 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
conserved protein of unknown function
13_2_20cm_2_scaffold_177_7
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

4902..5684
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BA46E
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_2_20cm_2_scaffold_177_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

5713..6048
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVZ8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW36000.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
13_2_20cm_2_scaffold_177_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6049..6846
DNA (798bp) protein (266aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] Tax=GWA2_Rokubacteria_73_35_curated
UPI0002971993 related cluster id=1866141 bin=GWA2_Methylomirabilis_73_35 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hpd; 4-hydroxyphenylpyruvate dioxygenase
13_2_20cm_2_scaffold_177_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6847..8376
DNA (1530bp) protein (510aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase id=4143225 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_177_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8455..9663)
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase id=3814357 bin=GWC2_Methylomirabilis_70_24 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
putative acyl-CoA dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
putative acyl-CoA dehydrogenase
13_2_20cm_2_scaffold_177_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

10054..11958
DNA (1905bp) protein (635aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE87_SINAD
asparagine synthase, glutamine-hydrolyzing Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
asparagine synthase
13_2_20cm_2_scaffold_177_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11949..13313
DNA (1365bp) protein (455aa)
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Dolichyl-phosphate-mannose-protein mannosyltransferase id=2315328 bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
13_2_20cm_2_scaffold_177_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13331..14482
DNA (1152bp) protein (384aa)
Nitrate reductase (NADH) {ECO:0000313|EMBL:EEF59049.1}; EC=1.7.1.1 {ECO:0000313|EMBL:EEF59049.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobi
Nitrate reductase (NADH) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM56_9BACT
putative sulfite oxidase protein
13_2_20cm_2_scaffold_177_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14485..15345)
DNA (861bp) protein (287aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=2592715 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NUDIX hydrolase
13_2_20cm_2_scaffold_177_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15362..16501)
DNA (1140bp) protein (380aa)
alkanal monooxygenase id=14627403 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alkanal monooxygenase Tax=CSP1_6_Rokubacteria
alkanal monooxygenase
13_2_20cm_2_scaffold_177_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16563..18023
DNA (1461bp) protein (487aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aminopeptidase P (EC:3.4.11.9)
Peptidase M24 id=2937755 bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_2_scaffold_177_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18048..18524
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein id=14430577 bin=bin3_NC10 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_177_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18549..19064)
DNA (516bp) protein (172aa)
ferripyochelin binding protein (fbp) id=14627404 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferripyochelin binding protein (fbp) Tax=CSP1_6_Rokubacteria
ferripyochelin binding protein (fbp)
13_2_20cm_2_scaffold_177_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19061..19957)
DNA (897bp) protein (299aa)
Alpha/beta hydrolase fold n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG07_XANP2
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_68_14_curated
alpha/beta hydrolase fold protein
13_2_20cm_2_scaffold_177_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20010..21053
DNA (1044bp) protein (348aa)
aminoglycoside phosphotransferase; K06979 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminoglycoside phosphotransferase
13_2_20cm_2_scaffold_177_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21087..22274)
DNA (1188bp) protein (396aa)
putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
fada7; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase id=4599720 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_2_scaffold_177_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22301..22519)
DNA (219bp) protein (73aa)
putative Endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
COG0251: Putative translation initiation inhibitor, yjgF family id=2937744 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endoribonuclease L-PSP
13_2_20cm_2_scaffold_177_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22627..23055
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626169 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_177_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23059..23640
DNA (582bp) protein (194aa)
metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_177_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23654..24805
DNA (1152bp) protein (384aa)
Beta-lactamase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMI2_METS4
Beta-lactamase {ECO:0000313|EMBL:KJB93805.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KAC
beta-lactamase
13_2_20cm_2_scaffold_177_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24832..25500)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_2_scaffold_177_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25554..26567)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase id=3732189 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
alcohol dehydrogenase
13_2_20cm_2_scaffold_177_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26605..26877)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_2_scaffold_177_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26921..29209)
DNA (2289bp) protein (763aa)
Inner-membrane translocator ABC transporter n=1 Tax=Sphingomonas sp. LH128 RepID=J8SH34_9SPHN
ABC transporter-like protein
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 39 in total

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