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13_2_20cm_2_scaffold_306

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_306_1
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(394..888)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002F7B66F
Uncharacterized protein {ECO:0000313|EMBL:KIJ77539.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
13_2_20cm_2_scaffold_306_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(885..1247)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00029A5C28
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_2_20cm_2_scaffold_306_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1273..1752)
DNA (480bp) protein (160aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Xanthine dehydrogenase id=3845492 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_2_20cm_2_scaffold_306_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1797..2279
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=5007760 bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
13_2_20cm_2_scaffold_306_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2316..3482)
DNA (1167bp) protein (389aa)
Beta-lactamase id=3879294 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
beta-lactamase Tax=GWC2_Rokubacteria_70_16_curated
beta-lactamase
13_2_20cm_2_scaffold_306_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3566..3805)
DNA (240bp) protein (80aa)
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_2_scaffold_306_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

4164..4580
DNA (417bp) protein (139aa)
id=2103040 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=2103040 Tax=GWC2_Nitrospirae_57_13_curated
13_2_20cm_2_scaffold_306_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

4626..7208
DNA (2583bp) protein (861aa)
id=4736578 Tax=GWC2_Nitrospirae_57_13_curated
id=4736578 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
13_2_20cm_2_scaffold_306_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

7227..8411
DNA (1185bp) protein (395aa)
WD40 domain protein beta Propeller id=4736577 bin=GWC2_Nitrospirae_57_13 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
hypothetical protein; K03641 TolB protein Tax=GWC2_Nitrospirae_57_13_curated
WD40 domain-containing protein
13_2_20cm_2_scaffold_306_10
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

8415..9896
DNA (1482bp) protein (494aa)
id=4911569 Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
id=4911569 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
13_2_20cm_2_scaffold_306_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9917..11533
DNA (1617bp) protein (539aa)
peptide ABC transporter periplasmic peptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Nitrospirae_57_9_curated
Extracellular solute-binding protein family 5 id=1884067 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
peptide-binding protein
13_2_20cm_2_scaffold_306_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11565..12551
DNA (987bp) protein (329aa)
Oligopeptide transport system permease protein AppB id=1884068 bin=GWD2_Nitrospirae-related_57_8 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits rbh
appB; oligopeptide ABC transporter membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWC2_Nitrospirae_57_13_curated
peptide permease
13_2_20cm_2_scaffold_306_13
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

12548..13441
DNA (894bp) protein (298aa)
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Binding-protein-dependent transport systems inner membrane component id=4736573 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
peptide ABC transporter permease
13_2_20cm_2_scaffold_306_14
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

13441..14538
DNA (1098bp) protein (366aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=GWC2_Nitrospirae_57_9_curated
Peptide/nickel transport system ATP-binding protein id=4911576 bin=GWC2_Nitrospirae-rel_56_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
peptide ABC transporter ATPase
13_2_20cm_2_scaffold_306_15
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

14558..15562
DNA (1005bp) protein (335aa)
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit id=4736571 bin=GWC2_Nitrospirae_57_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
oligopeptide/dipeptide ABC transporter ATPase
13_2_20cm_2_scaffold_306_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15585..18341
DNA (2757bp) protein (919aa)
Histidine kinase (EC:2.7.13.3) Tax=GWC2_RIF_CHLX_73_18_curated
Putative Histidine kinase id=2877061 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
two-component system sensor protein
13_2_20cm_2_scaffold_306_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18345..18725)
DNA (381bp) protein (127aa)
two-component system sensor protein (EC:2.7.3.-) Tax=GWA2_Rokubacteria_73_35_curated
cetoacetate metabolism regulatory protein atoC id=2772883 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein DctR
13_2_20cm_2_scaffold_306_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

19021..19770
DNA (750bp) protein (250aa)
3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] id=7718021 bin=BACIGN_2 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
3-oxoacyl-(acyl-carrier-protein) synthase III Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
3-oxoacyl-(acyl-carrier-protein) synthase III
13_2_20cm_2_scaffold_306_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

19822..20544
DNA (723bp) protein (241aa)
oxidoreductase id=14626050 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxidoreductase Tax=CSP1_6_Rokubacteria
N5,N10-methylenetetrahydromethanopterin reductase-related protein
13_2_20cm_2_scaffold_306_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(20541..21350)
DNA (810bp) protein (270aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4243645 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_306_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21497..23059
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=E0X6P7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX06590.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_2_scaffold_306_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23076..23381)
DNA (306bp) protein (102aa)
Mox cytochrome c like protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SSQ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETX08108.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Mox/cytochrome c like protein
13_2_20cm_2_scaffold_306_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23391..25064)
DNA (1674bp) protein (558aa)
quinoprotein ethanol dehydrogenase (EC:1.1.99.-)
Quinoprotein ethanol dehydrogenase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YN77_BRASO
Alcohol dehydrogenase {ECO:0000313|EMBL:ETW98770.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_2_20cm_2_scaffold_306_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25209..25898
DNA (690bp) protein (230aa)
putative lytic murein transglycosylase (EC:3.2.1.-)
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_306_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25873..26832)
DNA (960bp) protein (320aa)
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidoglycan-associated lipoprotein id=2546000 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
13_2_20cm_2_scaffold_306_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

27087..27479
DNA (393bp) protein (131aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
Histidine kinase id=2085288 bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine kinase
13_2_20cm_2_scaffold_306_27
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(27490..28191)
DNA (702bp) protein (234aa)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C (EC:1.3.3.11)
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C {ECO:0000313|EMBL:CCW35737.1}; EC=1.3.3.11 {ECO:0000313|EMBL:CCW35737.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonad
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZE9_9BACT
13_2_20cm_2_scaffold_306_28
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(28265..29722)
DNA (1458bp) protein (486aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:AEB11001.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEB11001.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marin
Amidase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNI6_MARHT
13_2_20cm_2_scaffold_306_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(29770..30222)
DNA (453bp) protein (151aa)
UspA domain-containing protein id=3995090 bin=GWA2_Methylomirabilis_73_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UspA domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
universal stress protein UspA-like protein
13_2_20cm_2_scaffold_306_30
unknown

Not on your lists

30358..30501
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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