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13_2_20cm_2_scaffold_1121

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1121_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..681
DNA (681bp) protein (227aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029N7_SOLUE
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM65482.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
amino acid permease
13_2_20cm_2_scaffold_1121_2
CG_Bacteroid_01, Bacteroidetes, Bacteria

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743..2251
DNA (1509bp) protein (503aa)
amino acid-transporting permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=CG_Bacteroid_01
Amino acid transport protein id=4128414 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
amino acid permease
13_2_20cm_2_scaffold_1121_3
unknown

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comp(2284..3030)
DNA (747bp) protein (249aa)

This feature has no annotations

13_2_20cm_2_scaffold_1121_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3186..3671
DNA (486bp) protein (162aa)
D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC:2.7.1.- 2.7.7.-) Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000361AB91
rfaE bifunctional protein
13_2_20cm_2_scaffold_1121_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3731..4327
DNA (597bp) protein (199aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU39_9BACT
phosphoribosylglycinamide formyltransferase
13_2_20cm_2_scaffold_1121_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4375..5376)
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2N3_9BACT
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
13_2_20cm_2_scaffold_1121_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5373..5999)
DNA (627bp) protein (209aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR53_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
glycerol-3-phosphate acyltransferase
13_2_20cm_2_scaffold_1121_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6006..7907)
DNA (1902bp) protein (634aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=497964 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
13_2_20cm_2_scaffold_1121_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7915..8685)
DNA (771bp) protein (257aa)
SNARE associated Golgi protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBI0_9BACT
SNARE associated Golgi protein {ECO:0000313|EMBL:EDY16167.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin4
hypothetical protein
13_2_20cm_2_scaffold_1121_10
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8766..9689)
DNA (924bp) protein (308aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadal
Methylenetetrahydrofolate reductase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3T2_PELCD
metF-1; 5,10-methylenetetrahydrofolate reductase
13_2_20cm_2_scaffold_1121_11
unknown

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9776..9967
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_2_scaffold_1121_12
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9871..10698)
DNA (828bp) protein (276aa)
Cyclase family protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8K9_CYAP2 rbh
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ADN13755.1}; Flags: Precursor;; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (stra
13_2_20cm_2_scaffold_1121_13
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10984..11697
DNA (714bp) protein (238aa)
Methyltransferase type 11 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZF9_ACISM
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADW68847.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain AT
13_2_20cm_2_scaffold_1121_14
unknown

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comp(11645..11749)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 14 items

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