ggKbase home page

13_2_20cm_2_scaffold_342

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_342_1
unknown

Not on your lists

79..540
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_2_scaffold_342_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(577..1077)
DNA (501bp) protein (167aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EEF62387.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EEF62387.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verruco
Nucleotide sugar dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD41_9BACT
UDP-N-acetyl-D-glucosamine dehydrogenase
13_2_20cm_2_scaffold_342_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1087..1872)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DC41B9
Cytosine deaminase {ECO:0000313|EMBL:KIF37969.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_2_20cm_2_scaffold_342_4
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2221..3834)
DNA (1614bp) protein (538aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H124_9GAMM
membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGA91762.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae;
13_2_20cm_2_scaffold_342_5
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3899..4648)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WPA0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ21377.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
13_2_20cm_2_scaffold_342_6
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4632..5690)
DNA (1059bp) protein (353aa)
glycosyltransferase (EC:2.4.-.-); K00786 [EC:2.4.-.-] Tax=GWF2_Planctomycetes_42_9_curated
Glycosyl transferase family 2 id=3069149 bin=GWF2_Planctomycetes_42_9 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
family 2 glycosyl transferase
13_2_20cm_2_scaffold_342_7
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5807..6787)
DNA (981bp) protein (327aa)
glycosyltransferase (EC:2.4.-.-); K00786 [EC:2.4.-.-] Tax=GWF2_Planctomycetes_42_9_curated
Glycosyl transferase family 2 id=3069149 bin=GWF2_Planctomycetes_42_9 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
glycosyl transferase 2 family protein
13_2_20cm_2_scaffold_342_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6907..7923)
DNA (1017bp) protein (339aa)
glycosyl transferase family 2 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=1750044 bin=GWD2_Desulfuromonadales_54_10 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
glycosyl transferase family 2
13_2_20cm_2_scaffold_342_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(7923..9251)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D8E6C
glycosyl transferase, group 1
Tax=BJP_IG2103_Bacteroidetes_41_9
13_2_20cm_2_scaffold_342_10
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9267..10220)
DNA (954bp) protein (318aa)
hypothetical protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWA2_Elusimicrobia_61_42_curated
Putative uncharacterized protein id=4958357 bin=GWA2_Elusi_like_61_42 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
13_2_20cm_2_scaffold_342_11

Not on your lists

comp(10204..11106)
DNA (903bp) protein (301aa)
Sulfotransferase protein n=1 Tax=sediment metagenome RepID=D9PIR1_9ZZZZ
Sulfotransferase protein {ECO:0000313|EMBL:EFK96557.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
sulfotransferase
13_2_20cm_2_scaffold_342_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11309..13129)
DNA (1821bp) protein (607aa)
Asparagine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV9_SYNFM rbh
asparagine synthase
Asparagine synthase {ECO:0000313|EMBL:ABK16661.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophob
13_2_20cm_2_scaffold_342_13
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13365..14102)
DNA (738bp) protein (246aa)
Methyltransferase type 12 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UK01_CYAP2
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADN14637.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
13_2_20cm_2_scaffold_342_14
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14129..15436)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035E8A38
glycosyl transferase group 1
Tax=BJP_IG2102_Porphyrobacter_62_18
13_2_20cm_2_scaffold_342_trna_1
unknown

Not on your lists

comp(15600..15671)
DNA (72bp)
transferRNA
13_2_20cm_2_scaffold_342_15
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15651..16637)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGW0_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK16662.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
13_2_20cm_2_scaffold_342_16
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16634..18328)
DNA (1695bp) protein (565aa)
Asparagine synthetase {ECO:0000313|EMBL:ESS72453.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ESS72453.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae;
asparagine synthase (EC:6.3.5.4)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FD125
Displaying 17 items

View Taxonomy