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13_2_20cm_2_scaffold_1839_8

Organism: 13_2_20CM_2_Verrucomicrobia_54_15

partial RP 20 / 55 BSCG 16 / 51 ASCG 6 / 38
Location: 4921..5718

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 252.0
  • Bit_score: 311
  • Evalue 6.80e-82
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 265.0
  • Bit_score: 315
  • Evalue 6.60e-83
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 253.0
  • Bit_score: 284
  • Evalue 2.50e-74

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 798
ATGCCTCTTCTGTCCCCCGATCAAGAGACCGAACTCGGGCGGCGAATCCAAGACGGTGACGCGGCAGCGCGCGAGCGGATGATCAACGCAAACCTGCGGCTCGTTGTAACCATCGCACGCGATTACATCAATCTCGGTCTGCCCCTGGTTGACCTGATTTCGGAAGGAAACATCGGATTAATGGAAGCAGTCGATCGATTCGACCCGGAAAAAGGCGTCAAGCTAAGCACCTATGCGATTTGGTGGATCAAGCGGGCGATCAAAAACGCACTTGCCAATCAGAGCAAAACGATCCGATTGCCGGCGAAAACGATCGAGAAAATTAGTAGAATGCGTCGCGTTTCAGCGCAAATGGGCAACGAGCTCGGTCGCGAACCGACTGAGGGCGAACTCGGTGAAGAGCTGGGGATTGCCACTGAAAAAGTGGCGCGACTGAGAAGTATTGGCCTGCGTCCCGAATCGCTTGACGCGCCTGTTGGCGACGATGAAGCGACCGAACTTGGCGAAAAAGTTCCAGATGAACAAGCGCAAACTCCTTTCGAATCACTGCGCGAGAAGGATTTCTCGGACCAGATCAATCGGGTTCTCAAAAACCTCAACAAACGCGACGCAACGATCATCGCAGAGCGTTTCGGGCTAAACGGCACGACAGCAAAACCGCTTGAACAGGTTGCCGAGATAGTCGGGGTAACGCGCGAACGCGTTCGGCAGTTGGAACTAATCGCACTCGCGAAATTGCGTCGCGCCTTCAAGAAGCATCTCGGCGCTCTGGAATCTGAAGTTTTCGTAGCAGCCTAG
PROTEIN sequence
Length: 266
MPLLSPDQETELGRRIQDGDAAARERMINANLRLVVTIARDYINLGLPLVDLISEGNIGLMEAVDRFDPEKGVKLSTYAIWWIKRAIKNALANQSKTIRLPAKTIEKISRMRRVSAQMGNELGREPTEGELGEELGIATEKVARLRSIGLRPESLDAPVGDDEATELGEKVPDEQAQTPFESLREKDFSDQINRVLKNLNKRDATIIAERFGLNGTTAKPLEQVAEIVGVTRERVRQLELIALAKLRRAFKKHLGALESEVFVAA*