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13_2_20cm_2_scaffold_85

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_85_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2..901)
DNA (900bp) protein (300aa)
putative sensor protein PilS (EC:2.7.13.3); K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative sensor protein PilS (EC:2.7.13.3)
Putative Sensor protein PilS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD6_9BACT
13_2_20cm_2_scaffold_85_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1068..2288)
DNA (1221bp) protein (407aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
pilC; type IV pilus biogenesis protein PilC
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:CBK40544.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_85_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2486..3022)
DNA (537bp) protein (179aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD3_9BACT
13_2_20cm_2_scaffold_85_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3175..3522
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_85_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3679..4818)
DNA (1140bp) protein (380aa)
Putative Esterase, beta-lactamase family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD1_9BACT rbh
putative esterase, beta-lactamase family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative esterase, beta-lactamase family
13_2_20cm_2_scaffold_85_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4853..5359)
DNA (507bp) protein (169aa)
Putative Cell division protein DivIVA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBD0_9BACT
putative cell division protein DivIVA
Putative Cell division protein DivIVA {ECO:0000313|EMBL:CBK40539.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_85_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5372..5668)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC9_9BACT
hypothetical protein; K02221 YggT family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_85_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5668..6468)
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC8_9BACT rbh
13_2_20cm_2_scaffold_85_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6553..7281)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC7_9BACT
yggS; hypothetical protein; K06997 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yggS; hypothetical protein
13_2_20cm_2_scaffold_85_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7366..8088)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC6_9BACT
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_85_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8134..9324)
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC5_9BACT rbh
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsZ; cell division protein FtsZ
13_2_20cm_2_scaffold_85_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9530..10765)
DNA (1236bp) protein (412aa)
Cell division protein ftsA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC4_9BACT rbh
ftsA; cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsA; cell division protein FtsA
13_2_20cm_2_scaffold_85_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10772..11677)
DNA (906bp) protein (302aa)
Putative Cell division protein FtsQ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC3_9BACT
polypeptide-transport-associated domain protein FtsQ-type; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cell division protein FtsQ
13_2_20cm_2_scaffold_85_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11730..12704)
DNA (975bp) protein (325aa)
ddlB; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ddlB; d-alanine-d-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC2_9BACT rbh
13_2_20cm_2_scaffold_85_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12841..13809)
DNA (969bp) protein (323aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC1_9BACT rbh
13_2_20cm_2_scaffold_85_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13806..15191)
DNA (1386bp) protein (462aa)
murC; UDP-N-acetylmuramate-L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
murC; UDP-N-acetylmuramate-L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBC0_9BACT rbh
13_2_20cm_2_scaffold_85_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15195..16340)
DNA (1146bp) protein (382aa)
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB9_9BACT rbh
13_2_20cm_2_scaffold_85_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16337..17539)
DNA (1203bp) protein (401aa)
Cell division protein FtsW n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB8_9BACT rbh
ftsW; cell division protein FtsW; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsW; cell division protein FtsW
13_2_20cm_2_scaffold_85_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17730..19121)
DNA (1392bp) protein (464aa)
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB7_9BACT rbh
13_2_20cm_2_scaffold_85_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19352..20428)
DNA (1077bp) protein (359aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB6_9BACT rbh
13_2_20cm_2_scaffold_85_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20497..21936)
DNA (1440bp) protein (480aa)
murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBK40524.1};; TaxID=330214 species="Bacteria; N
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB5_9BACT rbh
13_2_20cm_2_scaffold_85_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22014..23504)
DNA (1491bp) protein (497aa)
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB4_9BACT rbh
13_2_20cm_2_scaffold_85_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(23501..25216)
DNA (1716bp) protein (572aa)
ftsI; peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsI; peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB3_9BACT rbh
13_2_20cm_2_scaffold_85_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(25213..25545)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_85_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(25542..26417)
DNA (876bp) protein (292aa)
mraW; s-adenosyl-L-methionine-dependent methyltransferase mraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mraW; s-adenosyl-L-methionine-dependent methyltransferase mraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB1_9BACT rbh
Displaying 25 items

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