ggKbase home page

13_2_20cm_2_scaffold_2768

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2768_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1283
DNA (1281bp) protein (427aa)
Family 3 adenylate cyclase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CAZ5_DESTA
Uncharacterized protein {ECO:0000313|EMBL:ETW96871.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
family 3 adenylate cyclase
13_2_20cm_2_scaffold_2768_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1275..2300)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glyoxalase/bleomycin resistance protein/dioxygenase id=14429403 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_2768_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2368..3213
DNA (846bp) protein (282aa)
short-chain dehydrogenase/reductase SDR; K00034 glucose 1-dehydrogenase [EC:1.1.1.47] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glucose 1-dehydrogenase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VD13_9CYAN rbh
Short-chain dehydrogenase/reductase SDR
13_2_20cm_2_scaffold_2768_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3218..4780
DNA (1563bp) protein (521aa)
choline dehydrogenase-like flavoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
choline dehydrogenase-like flavoprotein id=14429404 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
GMC oxidoreductase
13_2_20cm_2_scaffold_2768_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4780..6762
DNA (1983bp) protein (661aa)
glycogen debranching protein (EC:3.2.1.33) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycogen debranching protein (EC:3.2.1.33) id=14626546 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
glycogen debranching protein (EC:3.2.1.33)
13_2_20cm_2_scaffold_2768_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6759..8369
DNA (1611bp) protein (537aa)
cyclic nucleotide-binding domain-containing protein; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cyclic nucleotide-binding domain protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L737_SIMNZ
cyclic nucleotide-binding domain-containing protein
13_2_20cm_2_scaffold_2768_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8384..11026
DNA (2643bp) protein (881aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14429401 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_2768_8
unknown

Not on your lists

11100..11990
DNA (891bp) protein (297aa)

This feature has no annotations

13_2_20cm_2_scaffold_2768_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11987..12577
DNA (591bp) protein (197aa)
glycosyl transferase family protein Tax=GWC2_Geobacteraceae_53_11_curated
Uncharacterized protein id=2590858 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
13_2_20cm_2_scaffold_2768_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

12616..13401
DNA (786bp) protein (262aa)
ABC transport protein, ATP-binding component n=31 Tax=Bordetella RepID=F4LH90_BORPC
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_2768_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

13398..14156
DNA (759bp) protein (253aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Solibacillus silvestris (strain StLB046) RepID=F2FA47_SOLSS
ABC transporter transmembrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
nitrate ABC transporter permease
13_2_20cm_2_scaffold_2768_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

14191..15168
DNA (978bp) protein (326aa)
Hypothetical NMT1/THI5 like family protein n=1 Tax=uncultured prokaryote AT5 RepID=D3W8I7_9ZZZZ
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
tauA; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
13_2_20cm_2_scaffold_2768_13
unknown

Not on your lists

comp(15154..15405)
DNA (252bp) protein (84aa)

This feature has no annotations

13_2_20cm_2_scaffold_2768_14
unknown

Not on your lists

15547..15846
DNA (300bp) protein (100aa)

This feature has no annotations

13_2_20cm_2_scaffold_2768_15
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15860..17281)
DNA (1422bp) protein (474aa)
Amidase {ECO:0000313|EMBL:CBN54627.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CBN54627.1};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillat
Amidase n=2 Tax=Oscillatoria RepID=D8FW87_9CYAN rbh
amidohydrolase, AtzE family
13_2_20cm_2_scaffold_2768_16
unknown

Not on your lists

comp(17278..17466)
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_2_scaffold_2768_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17463..17861)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000376DC4E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_2_20cm_2_scaffold_2768_18
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17858..18943)
DNA (1086bp) protein (362aa)
barbiturase (EC:3.5.2.1)
Barbiturase {ECO:0000313|EMBL:ABC20412.1}; EC=3.5.2.1 {ECO:0000313|EMBL:ABC20412.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella
Barbiturase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGM7_MOOTA rbh
13_2_20cm_2_scaffold_2768_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19000..19923)
DNA (924bp) protein (308aa)
ABC transporter permease protein 2 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF5_AZOC5
ABC transporter permease
ABC transporter permease protein 2 {ECO:0000313|EMBL:BAF89200.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizob
13_2_20cm_2_scaffold_2768_20
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19920..20966)
DNA (1047bp) protein (349aa)
ABC transporter permease 1 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF3_AZOC5 rbh
ABC transporter permease
ABC transporter permease 1 {ECO:0000313|EMBL:BAF89199.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caul
13_2_20cm_2_scaffold_2768_21
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20968..22506)
DNA (1539bp) protein (513aa)
Putative ABC-transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICF0_AZOC5 rbh
ABC transporter ATP-binding protein
Putative ABC-transporter ATP-binding protein {ECO:0000313|EMBL:BAF89198.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source=
13_2_20cm_2_scaffold_2768_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22545..23549)
DNA (1005bp) protein (335aa)
Uncharacterized ABC-type transport periplasmic component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICE7_AZOC5 rbh
ABC transporter periplasmic protein
Uncharacterized ABC-type transport periplasmic component {ECO:0000313|EMBL:BAF89197.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobiu
13_2_20cm_2_scaffold_2768_23
unknown

Not on your lists

comp(23768..23893)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 23 items

View Taxonomy