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13_2_20cm_2_scaffold_551

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_551_trna_1
unknown

Not on your lists

7..80
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_551_1
unknown

Not on your lists

255..545
DNA (291bp) protein (97aa)

This feature has no annotations

13_2_20cm_2_scaffold_551_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(883..1998)
DNA (1116bp) protein (372aa)
ISCps8, transposase id=4219936 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ISCps8, transposase Tax=GWA2_Rokubacteria_70_23_curated
ISCps8, transposase
13_2_20cm_2_scaffold_551_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2110..2727)
DNA (618bp) protein (206aa)
Uncharacterized protein id=2534867 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
LuxR family transcriptional regulator
13_2_20cm_2_scaffold_551_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2960..3463
DNA (504bp) protein (168aa)
Sulfite/ferredoxin reductase (cysI) (EC:1.8.7.1) Tax=GWA2_Rokubacteria_73_35_curated
Sulfite/ferredoxin reductase (cysI) (EC:1.8.7.1)
Putative Sulfite/ferredoxin reductase (CysI) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ2_9BACT
13_2_20cm_2_scaffold_551_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3460..4725
DNA (1266bp) protein (422aa)
Sulfite/ferredoxin reductase (cysI) (EC:1.8.7.1) Tax=GWA2_Rokubacteria_73_35_curated
Sulfite/ferredoxin reductase (cysI) (EC:1.8.7.1)
Putative Sulfite/ferredoxin reductase (CysI) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ2_9BACT
13_2_20cm_2_scaffold_551_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4722..5561
DNA (840bp) protein (280aa)
Putative Sulfite/ferredoxin reductase (CysI) id=4894274 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=GWA2_Rokubacteria_73_35_curated
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
13_2_20cm_2_scaffold_551_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..6162
DNA (627bp) protein (209aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Siroheme synthase id=3773013 bin=GWC2_Methylomirabilis_70_16 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
siroheme synthase
13_2_20cm_2_scaffold_551_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6159..7004
DNA (846bp) protein (282aa)
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=GWA2_Rokubacteria
uroporphyrin-III C-methyltransferase (EC:4.2.1.75 2.1.1.107)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase id=4894276 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_551_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6911..7615)
DNA (705bp) protein (235aa)
ABC transporter related n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8F1_METRJ
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter
13_2_20cm_2_scaffold_551_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7602..8369)
DNA (768bp) protein (256aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport ATP-binding protein LivG id=4734630 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG1; High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding)
13_2_20cm_2_scaffold_551_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8366..9280)
DNA (915bp) protein (305aa)
putative branched-chain amino acid ABC transporter (permease protein) Tax=GWA2_Rokubacteria_73_35_curated
Inner-membrane translocator id=4734631 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_2_20cm_2_scaffold_551_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9277..10149)
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345A3A9
Branched-chain amino acid ABC-type transport system, permease component Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_2_20cm_2_scaffold_551_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10149..11336)
DNA (1188bp) protein (396aa)
livK1; ABC-type branched-chain amino acid transport systems, periplasmic component Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid ABC transporter, amino acid-binding protein id=4734634 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
13_2_20cm_2_scaffold_551_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11409..12050
DNA (642bp) protein (214aa)
Manganese and iron superoxide dismutase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBL1_ANADF
manganese and iron superoxide dismutase
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:ABS26107.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_2_20cm_2_scaffold_551_15
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12047..12658
DNA (612bp) protein (204aa)
OsmY {ECO:0000313|EMBL:ACN15576.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophic
13_2_20cm_2_scaffold_551_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12693..13142
DNA (450bp) protein (150aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_2_scaffold_551_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13178..13969
DNA (792bp) protein (264aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=GWA2_Rokubacteria_73_35_curated
Short-chain dehydrogenase/reductase SDR id=3435260 bin=GWA2_Methylomirabilis_73_35 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
13_2_20cm_2_scaffold_551_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13981..14883
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase id=4950928 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
dTDP-4-dehydrorhamnose reductase Tax=GWC2_Rokubacteria_70_16_curated
dTDP-4-dehydrorhamnose reductase
13_2_20cm_2_scaffold_551_trna_2
unknown

Not on your lists

14915..14988
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_551_trna_3
unknown

Not on your lists

15010..15083
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_551_trna_4
unknown

Not on your lists

15111..15183
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_551_19
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15305..16063)
DNA (759bp) protein (253aa)
Serine/threonine protein kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6Y2_MYXSD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGC44641.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source
13_2_20cm_2_scaffold_551_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16305..17090)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22324.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_2_scaffold_551_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17118..17966)
DNA (849bp) protein (283aa)
von Willebrand factor type A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUT5_9BACT
von Willebrand factor type A {ECO:0000313|EMBL:EDY22323.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
Displaying 25 items

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