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13_2_20cm_2_scaffold_697

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_697_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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54..1175
DNA (1122bp) protein (374aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gamma-glutamyl kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] id=14626914 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
gamma-glutamyl kinase
13_2_20cm_2_scaffold_697_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1200..2456
DNA (1257bp) protein (419aa)
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Gamma-glutamyl phosphate reductase id=4828192 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
proA; gamma-glutamyl phosphate reductase
13_2_20cm_2_scaffold_697_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2458..3102
DNA (645bp) protein (215aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase id=2992186 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_697_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3099..3455
DNA (357bp) protein (119aa)
Iojap-like protein id=4787949 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iojap family protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_2_scaffold_697_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3534..3899
DNA (366bp) protein (122aa)
transcriptional regulators, TraR/DksA family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional regulators, TraR/DksA family id=14626910 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
transcriptional regulators, TraR/DksA family
13_2_20cm_2_scaffold_697_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3952..4902
DNA (951bp) protein (317aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4787945 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_697_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4918..5661
DNA (744bp) protein (248aa)
Amidophosphoribosyltransferase, putative id=4787943 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidophosphoribosyltransferase Tax=GWA2_Rokubacteria_73_35_curated
amidophosphoribosyltransferase
13_2_20cm_2_scaffold_697_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5708..6712
DNA (1005bp) protein (335aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) id=4787941 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_697_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6729..7913
DNA (1185bp) protein (395aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase id=4828185 bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_2_scaffold_697_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7913..8695
DNA (783bp) protein (261aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Triosephosphate isomerase id=4787937 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
triosephosphate isomerase
13_2_20cm_2_scaffold_697_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8692..9054
DNA (363bp) protein (121aa)
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Preprotein translocase, SecG subunit id=4787935 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
preprotein translocase subunit SecG
13_2_20cm_2_scaffold_697_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9055..10710
DNA (1656bp) protein (552aa)
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Oligopeptide-binding protein id=2992161 bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
oligopeptide-binding protein
13_2_20cm_2_scaffold_697_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10735..11727
DNA (993bp) protein (331aa)
Binding-protein-dependent transport systems inner membrane component id=4787931 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
binding-protein-dependent transport system inner membrane protein
13_2_20cm_2_scaffold_697_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11730..12590
DNA (861bp) protein (287aa)
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide ABC transporter, membrane protein id=4787929 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter membrane protein
13_2_20cm_2_scaffold_697_trna_1
unknown

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12615..12696
DNA (82bp)
transferRNA
13_2_20cm_2_scaffold_697_16
unknown

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12961..13764
DNA (804bp) protein (268aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_17
unknown

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13776..14015
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_18
unknown

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14171..14410
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_19
unknown

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14542..14925
DNA (384bp) protein (128aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_20
unknown

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14904..15182
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_2_scaffold_697_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15307..16233
DNA (927bp) protein (309aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase id=3340664 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_2_scaffold_697_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16329..16679
DNA (351bp) protein (117aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A id=4828151 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_2_scaffold_697_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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16649..17128
DNA (480bp) protein (160aa)
nuoB1_[H]; NADH-ubiquinone oxidoreductase chain B (EC:1.6.5.3) Tax=GWA2_Rokubacteria_70_23_curated
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B id=2992145 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_2_scaffold_697_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17129..17626
DNA (498bp) protein (166aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADH-quinone oxidoreductase subunit C id=2992141 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH (or F420H2) dehydrogenase subunit C
13_2_20cm_2_scaffold_697_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17626..19014
DNA (1389bp) protein (463aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2992135 bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_697_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19076..19558
DNA (483bp) protein (161aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=14627533 bin=bin7_NC10_sister species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
13_2_20cm_2_scaffold_697_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19555..20775
DNA (1221bp) protein (407aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH dehydrogenase I subunit F id=3990315 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADH-quinone oxidoreductase subunit F
13_2_20cm_2_scaffold_697_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20779..22350
DNA (1572bp) protein (524aa)
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin oxidoreductase Fe4S4 region id=14627535 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
13_2_20cm_2_scaffold_697_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22347..23435
DNA (1089bp) protein (363aa)
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] id=14627536 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3)
Displaying items 1-30 of 34 in total

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