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13_2_20cm_2_scaffold_16103

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_16103_1
unknown

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1..90
DNA (90bp) protein (30aa)

This feature has no annotations

13_2_20cm_2_scaffold_16103_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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101..637
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK22_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF59845.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
ECF subfamily RNA polymerase sigma-24 factor
13_2_20cm_2_scaffold_16103_3
unknown

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651..1001
DNA (351bp) protein (117aa)

This feature has no annotations

13_2_20cm_2_scaffold_16103_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1014..1943)
DNA (930bp) protein (310aa)
FMN adenylyltransferase; riboflavin kinase (EC:2.7.7.2 2.7.1.26); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
riboflavin biosynthesis protein RibF n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B5F
riboflavin biosynthesis protein RibF
13_2_20cm_2_scaffold_16103_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2073..2798)
DNA (726bp) protein (242aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ5_9BACT
tRNA pseudouridine synthase B
13_2_20cm_2_scaffold_16103_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2773..3648)
DNA (876bp) protein (292aa)
Phosphoesterase RecJ domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ4_9BACT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:EDY20595.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoesterase RecJ domain-containing protein
13_2_20cm_2_scaffold_16103_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3620..3970)
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
ribosome-binding factor A
13_2_20cm_2_scaffold_16103_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4023..6266)
DNA (2244bp) protein (748aa)
Translation initiation factor IF-2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ2_9BACT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
infB; translation initiation factor 2, GTPase
13_2_20cm_2_scaffold_16103_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6321..7571)
DNA (1251bp) protein (417aa)
NusA antitermination factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ1_9BACT rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flav
nusA; transcription elongation factor
13_2_20cm_2_scaffold_16103_10
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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7731..8636
DNA (906bp) protein (302aa)
4-amino-4-deoxy-L-arabinose transferase/PMT family glycosyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744955
glycosyl transferase family 39 Tax=GWF2_Lentisphaerae_49_21_curated
glycosyl transferase 39
Displaying 10 items

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