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13_2_20cm_2_scaffold_17880

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_17880_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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3..962
DNA (960bp) protein (320aa)
Methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK61_9BACT
methyltransferase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_2_20cm_2_scaffold_17880_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1190..1597
DNA (408bp) protein (136aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK63_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF59701.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3;
ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_17880_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1594..3168
DNA (1575bp) protein (525aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK64_9BACT
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:EEF59702.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrob
Substrate-binding region of ABC-type glycine betaine transport system
13_2_20cm_2_scaffold_17880_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3232..4677
DNA (1446bp) protein (482aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDM65688.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDM65688.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16)
Aldehyde dehydrogenase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G695_9CYAN
13_2_20cm_2_scaffold_17880_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4778..5251)
DNA (474bp) protein (158aa)
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBH1_9CHLR
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFH87955.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobac
N-acetyltransferase GCN5
13_2_20cm_2_scaffold_17880_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5297..7213)
DNA (1917bp) protein (639aa)
Sulfate adenylyltransferase, large subunit {ECO:0000313|EMBL:EEF59180.1}; EC=2.7.1.25 {ECO:0000313|EMBL:EEF59180.1};; EC=2.7.7.4 {ECO:0000313|EMBL:EEF59180.1};; TaxID=320771 species="Bacteria; Verruco
Sulfate adenylyltransferase, large subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLS3_9BACT
sulfate adenylyltransferase large subunit
13_2_20cm_2_scaffold_17880_7
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..7394)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q565V2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF07999.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibact
13_2_20cm_2_scaffold_17880_8
unknown

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comp(7381..7650)
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_2_scaffold_17880_9
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(7647..8372)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037876D3
Sulfate adenylyltransferase {ECO:0000313|EMBL:KIE58893.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.
cysH; sulfate adenylyltransferase subunit 2
13_2_20cm_2_scaffold_17880_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8633..9061
DNA (429bp) protein (143aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI0003712DF3
nuoB; NADH dehydrogenase subunit B
13_2_20cm_2_scaffold_17880_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9139..9714
DNA (576bp) protein (192aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4P5_9BACT
nuoC; NADH dehydrogenase subunit C
13_2_20cm_2_scaffold_17880_12
unknown

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9792..10133
DNA (342bp) protein (114aa)

This feature has no annotations

13_2_20cm_2_scaffold_17880_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10294..10731
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003155AFD
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AIF48718.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_2_20cm_2_scaffold_17880_14
Methylocystis parvus, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11824..12360
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002EE6320
13_2_20cm_2_scaffold_17880_15
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12724..13134
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ES98_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV06863.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
13_2_20cm_2_scaffold_17880_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13169..14809)
DNA (1641bp) protein (547aa)
Metal dependent phosphohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP5_9BACT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EDY16147.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-associated HD superfamily hydrolase
13_2_20cm_2_scaffold_17880_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14815..15789)
DNA (975bp) protein (325aa)
PhoH family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP6_9BACT
PhoH family protein {ECO:0000313|EMBL:EDY16148.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phoH; phosphate starvation-inducible protein PhoH, predicted ATPase
Displaying 17 items

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