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13_2_20cm_2_scaffold_6449

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_6449_1
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1..615
DNA (615bp) protein (205aa)
hemolysin III family channel protein; K11068 hemolysin III Tax=RBG_16_Gammaproteobacteria_51_14_curated
hemolysin III family channel protein; K11068 hemolysin III id=14624112 bin=bin5_DeltaP species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemolysin-3
13_2_20cm_2_scaffold_6449_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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669..1769
DNA (1101bp) protein (367aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL8_9BACT rbh
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDY20182.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
lrp; AsnC family transcriptional regulator
13_2_20cm_2_scaffold_6449_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1843..2484)
DNA (642bp) protein (214aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7V7_9BACT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
13_2_20cm_2_scaffold_6449_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2471..3319)
DNA (849bp) protein (283aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EDY17481.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EDY17481.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" so
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7V8_9BACT
13_2_20cm_2_scaffold_6449_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3638..4549)
DNA (912bp) protein (304aa)
5'-3' exonuclease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D756_9BACT
5'-3' exonuclease {ECO:0000313|EMBL:EDY17707.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
exo; 5'-3' exonuclease
13_2_20cm_2_scaffold_6449_6
unknown

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4562..5710
DNA (1149bp) protein (383aa)

This feature has no annotations

13_2_20cm_2_scaffold_6449_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5852..6301)
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ18243.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
13_2_20cm_2_scaffold_6449_8
unknown

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6598..6783
DNA (186bp) protein (62aa)

This feature has no annotations

13_2_20cm_2_scaffold_6449_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6807..7058
DNA (252bp) protein (84aa)
Heat shock protein Hsp20 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRD8_9BACT
Heat shock protein Hsp20 {ECO:0000313|EMBL:EEF57572.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Ped
heat shock protein, hsp20 family
13_2_20cm_2_scaffold_6449_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7081..7452
DNA (372bp) protein (124aa)
Heat shock protein Hsp20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D446_9BACT
Heat shock protein Hsp20 {ECO:0000313|EMBL:EDY18647.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
heat shock protein
13_2_20cm_2_scaffold_6449_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7652..8563
DNA (912bp) protein (304aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
recA protein (EC:3.6.3.8)
recombinase RecA n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745C24
Displaying 11 items

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