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13_2_20cm_2_scaffold_172

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_172_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(1..291)
DNA (291bp) protein (97aa)
Translation initiation factor 2 subunit beta n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYR2_METCG
eIF2B; translation initiation factor aIF-2, beta subunit; K03238 translation initiation factor 2 subunit 2 Tax=RBG_16_Archaea_50_20_curated
eif2b; translation initiation factor 2 subunit beta (eIF-2-beta) (aIF2-beta)
13_2_20cm_2_scaffold_172_2
RBG_16_Archaea_50_20_curated, Archaea

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540..2096
DNA (1557bp) protein (519aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Archaea_50_20_curated
Methionine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
13_2_20cm_2_scaffold_172_3
RBG_16_Archaea_50_20_curated, Archaea

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2086..2703
DNA (618bp) protein (206aa)
PHP domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW18_METFV
php domain protein; K07053 Tax=RBG_16_Archaea_50_20_curated
php domain-containing protein
13_2_20cm_2_scaffold_172_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(2822..3817)
DNA (996bp) protein (332aa)
Cell division protein FtsZ n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVI7_9EURY
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Bathyarchaeota_48_13_curated
cell division protein FtsZ
13_2_20cm_2_scaffold_172_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(4048..5601)
DNA (1554bp) protein (518aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RBG_16_Bathyarchaeota_48_13_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZMA3_THELI rbh
13_2_20cm_2_scaffold_172_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(5607..6626)
DNA (1020bp) protein (340aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Archaea_50_20_curated
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G8_9ARCH
glycine dehydrogenase subunit alpha
13_2_20cm_2_scaffold_172_7
AR10, Diapherotrites, DPANN, Archaea

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comp(6623..6862)
DNA (240bp) protein (80aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] id=5240854 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=AR10
13_2_20cm_2_scaffold_172_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7003..8028
DNA (1026bp) protein (342aa)
Putative glycosyl transferase, family 4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDG1_NITGG
glycosyl transferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glycosyl transferase, family 4
13_2_20cm_2_scaffold_172_9
AR10, Diapherotrites, DPANN, Archaea

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comp(8653..9657)
DNA (1005bp) protein (335aa)
hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=AR10
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F468D
hypothetical protein
13_2_20cm_2_scaffold_172_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9825..11522
DNA (1698bp) protein (566aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_2_20cm_2_scaffold_172_11
RBG_16_Archaea_50_20_curated, Archaea

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11543..12784
DNA (1242bp) protein (414aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_172_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(13235..13975)
DNA (741bp) protein (247aa)
putative uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase superfamily protein n=1 Tax=mine drainage metagenome RepID=T1BFR3_9ZZZZ
uracil-DNA glycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_2_scaffold_172_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(13948..14964)
DNA (1017bp) protein (339aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_2_20cm_2_scaffold_172_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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15172..16107
DNA (936bp) protein (312aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_2_20cm_2_scaffold_172_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16114..16845)
DNA (732bp) protein (244aa)
Putative Thiosulfate sulfurtransferase (Rhodanese-like protein) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYU7_POLGS
rhodanese domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
thiosulfate sulfurtransferase
13_2_20cm_2_scaffold_172_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(16928..17581)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N446_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_172_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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17704..18630
DNA (927bp) protein (309aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Thioredoxin reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBG9_THET1
thioredoxin reductase
13_2_20cm_2_scaffold_172_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18856..20031)
DNA (1176bp) protein (392aa)
Resistance protein NorA n=1 Tax=Ferroplasma sp. Type II RepID=T0NI81_9EURY
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC16058.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_2_20cm_2_scaffold_172_19
unknown

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comp(20216..20551)
DNA (336bp) protein (112aa)

This feature has no annotations

13_2_20cm_2_scaffold_172_20
RBG_16_Archaea_50_20_curated, Archaea

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comp(20857..22527)
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003783E79
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_172_21
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22524..23309)
DNA (786bp) protein (262aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7G5_METCZ
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AFD00831.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
13_2_20cm_2_scaffold_172_22
unknown

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comp(23391..24875)
DNA (1485bp) protein (495aa)

This feature has no annotations

13_2_20cm_2_scaffold_172_23
unknown

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comp(25074..25202)
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_2_scaffold_172_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(25258..26196)
DNA (939bp) protein (313aa)
asnA-2; L-asparagine amidohydrolase (EC:3.5.1.1); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RBG_16_Archaea_50_20_curated
PREDICTED: asparaginase-like 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9A42
asparaginase
13_2_20cm_2_scaffold_172_25
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26252..26881
DNA (630bp) protein (210aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZA4_DESAS
Sua5/YciO/YrdC/YwlC family protein
13_2_20cm_2_scaffold_172_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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26913..27437
DNA (525bp) protein (175aa)
Putative THUMP domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN99_NITGG
THUMP domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
THUMP domain-containing protein
13_2_20cm_2_scaffold_172_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(27434..27994)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RU85_METFO
hypothetical protein; K09119 hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_2_20cm_2_scaffold_172_28
RBG_16_Archaea_50_20_curated, Archaea

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comp(27978..28529)
DNA (552bp) protein (184aa)
Phosphoribosyltransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0W2_DICTD
purine phosphoribosyltransferase; K07101 Tax=RBG_16_Archaea_50_20_curated
phosphoribosyltransferase
13_2_20cm_2_scaffold_172_29
unknown

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28879..29460
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 29 items

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