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13_2_20cm_2_scaffold_466

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_466_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..627
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58407.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_2_20cm_2_scaffold_466_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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749..2068
DNA (1320bp) protein (440aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:ABG05008.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABG05008.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacter
Isocitrate lyase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC0_RUBXD
13_2_20cm_2_scaffold_466_3
unknown

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comp(2140..2325)
DNA (186bp) protein (62aa)

This feature has no annotations

13_2_20cm_2_scaffold_466_4
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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2413..3702
DNA (1290bp) protein (430aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7F1_9ARCH
13_2_20cm_2_scaffold_466_5
unknown

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comp(3765..4049)
DNA (285bp) protein (95aa)

This feature has no annotations

13_2_20cm_2_scaffold_466_6
unknown

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4207..4575
DNA (369bp) protein (123aa)

This feature has no annotations

13_2_20cm_2_scaffold_466_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4619..4996
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX82_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84519.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_2_20cm_2_scaffold_466_8
unknown

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comp(5692..6396)
DNA (705bp) protein (235aa)

This feature has no annotations

13_2_20cm_2_scaffold_466_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6527..7693
DNA (1167bp) protein (389aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_2_20cm_2_scaffold_466_10
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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7837..8409
DNA (573bp) protein (191aa)
Methyltransferase
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=1967489 bin=GWB2_Desulfobacterales_56_26 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
13_2_20cm_2_scaffold_466_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(8503..9402)
DNA (900bp) protein (300aa)
Aminoglycoside phosphotransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7Y1_CONWI
aminoglycoside phosphotransferase Tax=RBG_16_Chloroflexi_68_14_curated
aminoglycoside phosphotransferase
13_2_20cm_2_scaffold_466_12
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9436..9819)
DNA (384bp) protein (128aa)
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
aspartate 1-decarboxylase (EC:4.1.1.11)
aspartate decarboxylase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003717CB6
13_2_20cm_2_scaffold_466_13
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9955..11250)
DNA (1296bp) protein (432aa)
Transporter, major facilitator family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0U0_9ARCH
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ65333.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Ni
arabinose efflux permease family protein
13_2_20cm_2_scaffold_466_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(11211..11789)
DNA (579bp) protein (193aa)
Transcriptional regulator, PadR family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1XZP2_ANEAE
putative transcriptional regulator Tax=CG_Dehalo_02
PadR-like family transcriptional regulator
13_2_20cm_2_scaffold_466_15

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11886..12365
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C051A
Rhodanese domain protein {ECO:0000313|EMBL:EQD59635.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_2_scaffold_466_16

Not on your lists

12468..13298
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BUI5_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_2_scaffold_466_17
unknown

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13415..13729
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_2_scaffold_466_18
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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13862..15199
DNA (1338bp) protein (446aa)
FAD dependent oxidoreductase id=2138951 bin=GWE2_Bacteroidetes_41_25 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
Malate dehydrogenase (acceptor) Tax=GWA2_Bacteroidetes_40_15_curated
malate dehydrogenase
13_2_20cm_2_scaffold_466_19
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15482..16444
DNA (963bp) protein (321aa)
Amino acid permease-associated region n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIS0_BEII9
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:ACB96132.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia
Displaying 19 items

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