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13_2_20cm_2_scaffold_117_17

Organism: 13_2_20CM_2_Archaea_53_6

partial RP 32 / 55 MC: 6 BSCG 11 / 51 ASCG 24 / 38 MC: 1
Location: comp(14337..14972)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 188.0
  • Bit_score: 212
  • Evalue 4.80e-52
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 210.0
  • Bit_score: 184
  • Evalue 1.00e-43
RNA polymerase insert similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 210.0
  • Bit_score: 184
  • Evalue 2.80e-44

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 636
ATGGATATCAAGGTCCTGAACAGGGAACAAGACACCTTACGCTTTGTTCTTTCCGATGTTTCGCCAGCCTTCGCGAATGCGATCCGACGAATCATCCTCGCGGAAGTCCCAGTTATGGCGATCGATGATGTCATGATTCTCGAGAACAGTTCTGTCATGTACGACGAGATACTCGCCCACCGCCTCGGGCTTATCCCGGTAACCACGGACCCAACATACAACCTGCCAGAAGAATGCACCTGCAAGAGCGAACTGGGATGCGAAAAATGCAGAGCATCATTATCGCTTGAGATTGAAGCCTCGGACCCGGTCGAAGTAGTGTACACGTCAAACCTGAAGCCGGAGAATCCAGAGGTGAAGCCCGTCTCAGACAAGATCCCAATCGTAAAACTCGCTCAGGGACAGAGGGTGAAGCTTGAGGCATACGCTCGGCTAGGAAGAGGAAGAGATCACGCAAAGTGGCAGCCGGCCTCAGCTTGCACGTACAGCTATGACGAGAAACTACGAACTTTCAGTTTCTTGGTGGAATCAACCGGAACACTGCCGCCGGAGAAACTCGTACTCGAAGCAGCACGACTGATCAACGGAAAGACACTCGGCTTTGAAGAAGGACTCGGAGCAGTAGTCGAGAAATGA
PROTEIN sequence
Length: 212
MDIKVLNREQDTLRFVLSDVSPAFANAIRRIILAEVPVMAIDDVMILENSSVMYDEILAHRLGLIPVTTDPTYNLPEECTCKSELGCEKCRASLSLEIEASDPVEVVYTSNLKPENPEVKPVSDKIPIVKLAQGQRVKLEAYARLGRGRDHAKWQPASACTYSYDEKLRTFSFLVESTGTLPPEKLVLEAARLINGKTLGFEEGLGAVVEK*