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13_2_20cm_2_scaffold_530

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_530_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..539
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_530_2
unknown

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536..1216
DNA (681bp) protein (227aa)

This feature has no annotations

13_2_20cm_2_scaffold_530_3
unknown

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1273..1371
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_2_scaffold_530_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

1457..3010
DNA (1554bp) protein (518aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBS6_9BACT
2-isopropylmalate synthase
13_2_20cm_2_scaffold_530_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

3017..4693
DNA (1677bp) protein (559aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Acetolactate synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV2_THET1
acetolactate synthase large subunit
13_2_20cm_2_scaffold_530_6
unknown

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4690..4950
DNA (261bp) protein (87aa)

This feature has no annotations

13_2_20cm_2_scaffold_530_7
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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4947..6011
DNA (1065bp) protein (355aa)
Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4Y1_THEGP
13_2_20cm_2_scaffold_530_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6008..7435
DNA (1428bp) protein (476aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35) id=14425708 bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
isopropylmalate isomerase large subunit (EC:4.2.1.33)
13_2_20cm_2_scaffold_530_9
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7435..8019
DNA (585bp) protein (195aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Geobacillus sp. JF8 RepID=S5Z819_9BACI
isopropylmalate isomerase
13_2_20cm_2_scaffold_530_10
unknown

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comp(8091..8450)
DNA (360bp) protein (120aa)

This feature has no annotations

13_2_20cm_2_scaffold_530_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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8455..8985
DNA (531bp) protein (177aa)
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
3-isopropylmalate dehydrogenase n=1 Tax=Acidithiobacillus ferrooxidans RepID=LEU3_ACIFR
3-isopropylmalate dehydrogenase
13_2_20cm_2_scaffold_530_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8982..10658
DNA (1677bp) protein (559aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035DBF2D
13_2_20cm_2_scaffold_530_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10655..11500
DNA (846bp) protein (282aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] Tax=RBG_16_Chloroflexi_63_12_curated
prephenate dehydratase (EC:4.2.1.51)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003697C56
13_2_20cm_2_scaffold_530_14
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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12091..13125
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5H8_ANAVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA23758.1}; Flags: Precursor;; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 2
13_2_20cm_2_scaffold_530_trna_7
unknown

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comp(13249..13322)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_6
unknown

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comp(13360..13434)
DNA (75bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_5
unknown

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comp(13479..13552)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_4
unknown

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comp(13556..13629)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_3
unknown

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comp(13721..13794)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_2
unknown

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comp(13822..13894)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_530_trna_1
unknown

Not on your lists

comp(13951..14023)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_530_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14178..15143
DNA (966bp) protein (322aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_2_20cm_2_scaffold_530_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15202..15963
DNA (762bp) protein (254aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH0_GEMAT
putative transporter; K02066 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transporter
13_2_20cm_2_scaffold_530_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15960..16685
DNA (726bp) protein (242aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT
putative ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter related protein
13_2_20cm_2_scaffold_530_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16682..17689
DNA (1008bp) protein (336aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH1_GEMAT
putative transporter; K02067 putative ABC transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transporter
13_2_20cm_2_scaffold_530_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17693..18163
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A694_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NUDIX hydrolase
13_2_20cm_2_scaffold_530_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18160..18945
DNA (786bp) protein (262aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A695_GEMAT
AraC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AraC family transcriptional regulator
13_2_20cm_2_scaffold_530_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19023..20555
DNA (1533bp) protein (511aa)
atpA; ATP synthase alpha chain (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATP synthase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A696_GEMAT rbh
ATP synthase subunit alpha
13_2_20cm_2_scaffold_530_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20555..21433
DNA (879bp) protein (293aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATP synthase gamma chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPG_GEMAT
ATP synthase gamma chain
13_2_20cm_2_scaffold_530_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21437..22837
DNA (1401bp) protein (467aa)
atpD; ATP synthase beta chain (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A698_GEMAT
Displaying items 1-30 of 52 in total

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