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13_2_20cm_2_scaffold_940

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_940_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1340)
DNA (1338bp) protein (446aa)
aldehyde dehydrogenase n=1 Tax=Meiothermus timidus RepID=UPI00037A7618
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_940_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1340..2341)
DNA (1002bp) protein (334aa)
Deoxyribose-phosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C7_GEMAT
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AHG90560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_940_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2373..3557)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P851_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_2_scaffold_940_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3611..4375
DNA (765bp) protein (255aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Gemmatimonadetes_66_8_curated
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24407690 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Calcineurin-like phosphoesterase superfamily domain protein
13_2_20cm_2_scaffold_940_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4347..5147)
DNA (801bp) protein (267aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate racemase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7X2_GEOLS
Glutamate racemase
13_2_20cm_2_scaffold_940_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5144..5677)
DNA (534bp) protein (178aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_940_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5626..6411)
DNA (786bp) protein (262aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TXD5_ALKMQ
diacylglycerol kinase catalytic subunit; K07029 Tax=GWC2_Gemmatimonadetes_71_10_curated
diacylglycerol kinase catalytic subunit
13_2_20cm_2_scaffold_940_8
unknown

Not on your lists

comp(6600..6944)
DNA (345bp) protein (115aa)

This feature has no annotations

13_2_20cm_2_scaffold_940_9
unknown

Not on your lists

comp(7038..7385)
DNA (348bp) protein (116aa)

This feature has no annotations

13_2_20cm_2_scaffold_940_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7852..8229)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0B4_NITSE
endoribonuclease l-psp; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
endoribonuclease l-psp
13_2_20cm_2_scaffold_940_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8229..9911)
DNA (1683bp) protein (561aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
13_2_20cm_2_scaffold_940_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9908..10627)
DNA (720bp) protein (240aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Hydrolase, TatD family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2H5_9BACT
hydrolase, TatD family
13_2_20cm_2_scaffold_940_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10681..11709)
DNA (1029bp) protein (343aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
SecF protein
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_940_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11709..13337)
DNA (1629bp) protein (543aa)
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SecD export membrane protein
13_2_20cm_2_scaffold_940_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13337..14233)
DNA (897bp) protein (299aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=379066 species="Bacteria; Gemmatimonad
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
13_2_20cm_2_scaffold_940_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14233..15072)
DNA (840bp) protein (280aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SD90_9DELT
tRNA pseudouridine synthase B
13_2_20cm_2_scaffold_940_17
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(15084..15440)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUM1_DESRL
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ribosome-binding factor A
13_2_20cm_2_scaffold_940_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15440..15706)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86135.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_2_scaffold_940_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15718..18363)
DNA (2646bp) protein (882aa)
Translation initiation factor IF-2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N8_GEMAT
initiation factor 2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_940_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18366..18557)
DNA (192bp) protein (64aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_940_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18662..19990)
DNA (1329bp) protein (443aa)
Transcription elongation protein NusA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N6_GEMAT
nusA; transcription elongation protein NusA; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nusA; transcription elongation protein NusA
13_2_20cm_2_scaffold_940_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20399..21193)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N4_GEMAT
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_940_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21174..22415)
DNA (1242bp) protein (414aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhizobium sp. CF142 RepID=J2L3J3_9RHIZ
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_2_20cm_2_scaffold_940_24
unknown

Not on your lists

22497..23477
DNA (981bp) protein (327aa)

This feature has no annotations

13_2_20cm_2_scaffold_940_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23474..23854
DNA (381bp) protein (127aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_940_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23851..24774
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N1_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
phospholipase C/P1 nuclease
13_2_20cm_2_scaffold_940_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24771..26081)
DNA (1311bp) protein (437aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=4921245 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
13_2_20cm_2_scaffold_940_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26081..27448)
DNA (1368bp) protein (456aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Gem
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M9_GEMAT rbh
13_2_20cm_2_scaffold_940_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27445..27744)
DNA (300bp) protein (100aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_940_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27741..29987)
DNA (2247bp) protein (749aa)
ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT
Displaying items 1-30 of 36 in total

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