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13_2_20cm_2_scaffold_3000

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3000_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

13_2_20cm_2_scaffold_3000_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

227..1237
DNA (1011bp) protein (337aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=2 Tax=Anaeromyxobacter RepID=B4UC28_ANASK
response regulator receiver modulated metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
response regulator receiver modulated metal dependent phosphohydrolase
13_2_20cm_2_scaffold_3000_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1442..2620
DNA (1179bp) protein (393aa)
RND family efflux transporter MFP subunit n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QIP5_9CYAN
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RND family efflux transporter MFP subunit
13_2_20cm_2_scaffold_3000_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2815..3315)
DNA (501bp) protein (167aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HGE2_9ACTN
hypothetical protein
Putative hydrolase {ECO:0000313|EMBL:ELZ29211.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
13_2_20cm_2_scaffold_3000_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

3342..5756
DNA (2415bp) protein (805aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_2_scaffold_3000_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5763..6431
DNA (669bp) protein (223aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC transporter-like protein id=12555671 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
ABC transporter-like protein
13_2_20cm_2_scaffold_3000_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6424..7833
DNA (1410bp) protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YY3_SOLUE rbh
Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Fis family transcriptional regulator
13_2_20cm_2_scaffold_3000_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8103..9263
DNA (1161bp) protein (387aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YY2_SOLUE
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
multi-sensor signal transduction histidine kinase
13_2_20cm_2_scaffold_3000_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9326..9802
DNA (477bp) protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_2_20cm_2_scaffold_3000_10
unknown

Not on your lists

9857..10021
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_2_scaffold_3000_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10070..10471
DNA (402bp) protein (134aa)
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
Family membership id=4677594 bin=GWA2_Elusimicrobia_56_46 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
response regulator
13_2_20cm_2_scaffold_3000_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10468..10704)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_2_20cm_2_scaffold_3000_13
unknown

Not on your lists

11106..11504
DNA (399bp) protein (133aa)

This feature has no annotations

13_2_20cm_2_scaffold_3000_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11531..11980)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00035E1D30
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG89329.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_3000_15
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11983..12843)
DNA (861bp) protein (287aa)
Amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQI3_9RHIZ
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX82898.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium
extracellular solute-binding protein family 3
13_2_20cm_2_scaffold_3000_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12827..13834)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037054BE
Methanol dehydrogenase {ECO:0000313|EMBL:ESY73899.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
PQQ-dependent dehydrogenase, methanol/ethanol family
13_2_20cm_2_scaffold_3000_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14576)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037054BE
Methanol dehydrogenase {ECO:0000313|EMBL:KJC56790.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
PQQ-dependent dehydrogenase, methanol/ethanol family
13_2_20cm_2_scaffold_3000_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14579..14986)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000371AA1B
Cytochrome c2 {ECO:0000313|EMBL:EIM28072.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga
conserved exported protein of unknown function
13_2_20cm_2_scaffold_3000_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15052..16191)
DNA (1140bp) protein (380aa)
FAD dependent oxido reductase n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JAJ2_9BACT rbh
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
FAD dependent oxidoreductase
13_2_20cm_2_scaffold_3000_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16294..18441)
DNA (2148bp) protein (716aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Prolyl endopeptidase n=1 Tax=mine drainage metagenome RepID=T1B914_9ZZZZ rbh
peptidase S9A prolyl oligopeptidase domain protein beta-propeller
13_2_20cm_2_scaffold_3000_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18463..19737)
DNA (1275bp) protein (425aa)
GDSL family lipase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B75F16 rbh
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:KFC76461.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.
G-D-S-L family lipolytic protein
13_2_20cm_2_scaffold_3000_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19812..21818
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380045C rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
Displaying 22 items

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