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13_2_20cm_2_scaffold_1609

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1609_1
unknown

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3..308
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_2_scaffold_1609_2
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(333..2426)
DNA (2094bp) protein (698aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003725969
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKQ67574.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="O
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
13_2_20cm_2_scaffold_1609_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2575..2832)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI9_KORVE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_1609_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2832..3665)
DNA (834bp) protein (278aa)
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6J4_SPHTD
13_2_20cm_2_scaffold_1609_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3658..4563)
DNA (906bp) protein (302aa)
nadA; quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
quinolinate synthetase complex subunit A (EC:2.1.1.63)
Quinolinate synthetase complex, A subunit n=2 Tax=Chloroflexus RepID=A9WA69_CHLAA
13_2_20cm_2_scaffold_1609_6
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4638..7976
DNA (3339bp) protein (1113aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036E7BE0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR02689.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
hypothetical protein
13_2_20cm_2_scaffold_1609_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7984..8391)
DNA (408bp) protein (136aa)
alias=16ft_combo_ws3_scaffold_11273_12 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_2_scaffold_1609_8
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(8434..9705)
DNA (1272bp) protein (424aa)
pyridoxal-dependent decarboxylase; K01593 aromatic-L-amino-acid decarboxylase [EC:4.1.1.28] Tax=RBG_13_OP8X_37_8_curated
PREDICTED: aromatic-L-amino-acid decarboxylase isoform 3 n=1 Tax=Loxodonta africana RepID=UPI0002233C34
putative aromatic amino acid decarboxylase
13_2_20cm_2_scaffold_1609_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9735..11276)
DNA (1542bp) protein (514aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4482662 bin=GWC2_Elusimicrobia_51_8 species=Pseudoalteromonas agarivorans genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
13_2_20cm_2_scaffold_1609_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11290..11844)
DNA (555bp) protein (185aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_1609_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11869..12237
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Deinococcus wulumuqiensis RepID=UPI00034BE647
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AGA77343.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain D
13_2_20cm_2_scaffold_1609_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12292..13662)
DNA (1371bp) protein (457aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT
glutamine synthetase, type I
13_2_20cm_2_scaffold_1609_13
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13756..15087)
DNA (1332bp) protein (444aa)
glutamine synthetase, type I; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RBG_16_Actinobacteria_70_17_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037E2443
glutamine synthetase, type I
13_2_20cm_2_scaffold_1609_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15367..15636)
DNA (270bp) protein (90aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_1609_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15737..17167
DNA (1431bp) protein (477aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD
periplasmic solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF178
13_2_20cm_2_scaffold_1609_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17236..18309
DNA (1074bp) protein (358aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_2_20cm_2_scaffold_1609_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18336..19220
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase id=2099795 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_1609_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19395..19823)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
General secretion pathway protein H id=1748905 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_1609_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20027..21292
DNA (1266bp) protein (422aa)
Tetratricopeptide TPR_2 n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FD32_SACEN
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_1609_20
unknown

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comp(21298..21435)
DNA (138bp) protein (46aa)

This feature has no annotations

13_2_20cm_2_scaffold_1609_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21574..21987
DNA (414bp) protein (138aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R9_9BACT
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver modulated diguanylate cyclase
13_2_20cm_2_scaffold_1609_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21984..22643
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_1609_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22672..23256
DNA (585bp) protein (195aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
13_2_20cm_2_scaffold_1609_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23253..24266
DNA (1014bp) protein (338aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protease HtpX homolog id=2725088 bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
HtpX-2 peptidase
13_2_20cm_2_scaffold_1609_25
unknown

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comp(24358..24561)
DNA (204bp) protein (68aa)

This feature has no annotations

13_2_20cm_2_scaffold_1609_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(24661..25605)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1Y9_HERA2
membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_2_20cm_2_scaffold_1609_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25602..26300)
DNA (699bp) protein (233aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJW8_ANASK
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDM64129.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
polysaccharide deacetylase
13_2_20cm_2_scaffold_1609_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26873..27496)
DNA (624bp) protein (208aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_1609_29
unknown

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27544..27744
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 29 items

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