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13_2_20cm_2_scaffold_201

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_201_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..391
DNA (390bp) protein (130aa)
Protein-export membrane protein SecG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A908_GEMAT
secG; protein-export membrane protein SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
secG; protein-export membrane protein SecG
13_2_20cm_2_scaffold_201_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

408..1487
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
13_2_20cm_2_scaffold_201_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1546..1860
DNA (315bp) protein (105aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_2_20cm_2_scaffold_201_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1962..3746
DNA (1785bp) protein (595aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZT2_9SYNC
peptidase M61 domain-containing protein
Peptidase M61 {ECO:0000313|EMBL:KIF21300.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
13_2_20cm_2_scaffold_201_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

3770..4036
DNA (267bp) protein (89aa)
Molybdopterin synthase sulfur carrier subunit n=2 Tax=Zea mays RepID=MOC2A_MAIZE
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
thiamine S protein
13_2_20cm_2_scaffold_201_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4044..4496
DNA (453bp) protein (151aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdopterin biosynthesis MoaE protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJF4_9CHLR
molybdopterin converting factor-like protein
13_2_20cm_2_scaffold_201_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4489..5526
DNA (1038bp) protein (346aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein id=14626248 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=CSP1_6_Rokubacteria
moaA; molybdenum cofactor biosynthesis protein A
13_2_20cm_2_scaffold_201_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

5556..6485
DNA (930bp) protein (310aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Acidobacteria_68_9_curated
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
13_2_20cm_2_scaffold_201_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

6497..7288
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
putative integral membrane protein
13_2_20cm_2_scaffold_201_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7288..9078
DNA (1791bp) protein (597aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14430250 bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=CSP1_5_NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
13_2_20cm_2_scaffold_201_11

Not on your lists

9081..9824
DNA (744bp) protein (248aa)
Succinate dehydrogenase subunit B n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF66_9BACT
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:EQB62873.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
fumarate reductase iron-sulfur subunit
13_2_20cm_2_scaffold_201_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9912..10250
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000365D217
UPF0145 protein Cflav_PD5227 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
hypothetical protein
13_2_20cm_2_scaffold_201_13
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

10263..11501
DNA (1239bp) protein (413aa)
putative oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Chloroflexi_66_10_curated
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein id=4451068 bin=GWF2_Lentisphaerae_57_35 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
FAD-dependent pyridine nucleotide-disulfide oxidoreductase family protein
13_2_20cm_2_scaffold_201_14
unknown

Not on your lists

comp(11488..11751)
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_2_scaffold_201_15
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11760..13610)
DNA (1851bp) protein (617aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=GWC2_Elusimicrobia_65_9_curated
Integral membrane sensor hybrid histidine kinase id=1843283 bin=GWA2_Elusimicrobia_66_18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
periplasmic sensor signal transduction histidine kinase
13_2_20cm_2_scaffold_201_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13808..14236
DNA (429bp) protein (143aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_201_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14244..14804)
DNA (561bp) protein (187aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=GWC2_Gemmatimonadetes_71_10_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
13_2_20cm_2_scaffold_201_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14914..15282
DNA (369bp) protein (123aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z4_GEMAT
NAD(P)H-quinone oxidoreductase subunit 3
13_2_20cm_2_scaffold_201_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15290..15910
DNA (621bp) protein (207aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_2_20cm_2_scaffold_201_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15907..16524
DNA (618bp) protein (206aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
13_2_20cm_2_scaffold_201_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16521..17807
DNA (1287bp) protein (429aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
13_2_20cm_2_scaffold_201_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17804..18325
DNA (522bp) protein (174aa)
nuoE; NADH-quinone oxidoreductase chain E (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit
13_2_20cm_2_scaffold_201_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18432..19712
DNA (1281bp) protein (427aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_2_20cm_2_scaffold_201_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19727..21295
DNA (1569bp) protein (523aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
13_2_20cm_2_scaffold_201_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21292..22455
DNA (1164bp) protein (388aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
13_2_20cm_2_scaffold_201_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22455..22961
DNA (507bp) protein (169aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
13_2_20cm_2_scaffold_201_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22965..23486
DNA (522bp) protein (174aa)
nuoJ; NADH-quinone oxidoreductase chain J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH dehydrogenase I subunit J id=4834597 bin=GWC2_Ignavibacteria_56_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_2_20cm_2_scaffold_201_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23487..23783
DNA (297bp) protein (99aa)
nuoK-1; NADH dehydrogenase I subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NADH:ubiquinone oxidoreductase subunit K n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6B929
NAD(P)H-quinone oxidoreductase subunit 4L
13_2_20cm_2_scaffold_201_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23783..25762
DNA (1980bp) protein (660aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
13_2_20cm_2_scaffold_201_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25766..27274
DNA (1509bp) protein (503aa)
NADH dehydrogenase subunit M (EC:1.6.5.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.99.5 1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M id=2042883 bin=GWB2_Elusimicrobia_63_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Displaying items 1-30 of 44 in total

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