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13_2_20cm_2_scaffold_4265

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4265_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..1273
DNA (1272bp) protein (424aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZQ11_PAEAL
13_2_20cm_2_scaffold_4265_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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1266..1709
DNA (444bp) protein (148aa)
Putative heat shock protein, Hsp20 family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L020_THERP
putative heat shock protein, Hsp20 family
Putative heat shock protein, Hsp20 family {ECO:0000313|EMBL:ACM04634.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium
13_2_20cm_2_scaffold_4265_3
bacterium UASB270, Bacteria

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1710..4061
DNA (2352bp) protein (784aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=7200705 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ATP-dependent protease La (EC:3.4.21.53)
13_2_20cm_2_scaffold_4265_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4007..4309
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_2_20cm_2_scaffold_4265_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4340..4540
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF0130_06E03 RepID=E0XSX5_9BACT id=5225635 bin=16ft_combo_ws3_JS1 species=uncultured bacterium HF0130_06E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_4265_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4553..5368
DNA (816bp) protein (272aa)
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Putative uncharacterized protein id=4042392 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_4265_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5365..6771
DNA (1407bp) protein (469aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEM1_ANASK
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_2_20cm_2_scaffold_4265_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6768..8387
DNA (1620bp) protein (540aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_4265_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8384..9349
DNA (966bp) protein (322aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Thiamine-monophosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y1_GEMAT
thiamine-monophosphate kinase
13_2_20cm_2_scaffold_4265_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9346..9951
DNA (606bp) protein (202aa)
acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGR9_DESAR
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_2_20cm_2_scaffold_4265_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9965..11245
DNA (1281bp) protein (427aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENO_GEMAT
Enolase
13_2_20cm_2_scaffold_4265_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11242..11544
DNA (303bp) protein (101aa)
Septum formation initiator
Septum formation initiator Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_4265_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(11567..12217)
DNA (651bp) protein (217aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_4265_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12214..13269)
DNA (1056bp) protein (352aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_4265_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13266..14858)
DNA (1593bp) protein (531aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YRU7_NOCFA
serine/threonine protein kinase
13_2_20cm_2_scaffold_4265_16
unknown

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15159..15341
DNA (183bp) protein (61aa)

This feature has no annotations

13_2_20cm_2_scaffold_4265_17
unknown

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15995..16216
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_2_scaffold_4265_trna_1
unknown

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16357..16430
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_4265_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(16495..17853)
DNA (1359bp) protein (453aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
13_2_20cm_2_scaffold_4265_19
unknown

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18000..19505
DNA (1506bp) protein (502aa)

This feature has no annotations

13_2_20cm_2_scaffold_4265_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(19521..20120)
DNA (600bp) protein (200aa)
flavin reductase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14424636 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
flavin reductase domain-containing protein
13_2_20cm_2_scaffold_4265_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20144..21502
DNA (1359bp) protein (453aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA(Ile)-lysidine synthase id=4681946 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell cycle protein
13_2_20cm_2_scaffold_4265_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21459..22013
DNA (555bp) protein (185aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_2_20cm_2_scaffold_4265_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22014..22742
DNA (729bp) protein (243aa)
ftsH; ATP-dependent protease FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT
peptidase M41 FtsH domain protein
Displaying 24 items

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