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13_2_20cm_2_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_112_1
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62..337
DNA (276bp) protein (92aa)
Phage integrase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQM1_9ACTO
Phage integrase {ECO:0000313|EMBL:EEP73546.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
13_2_20cm_2_scaffold_112_trna_3
unknown

Not on your lists

comp(369..441)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_112_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

546..1808
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003787641 rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADL44762.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurant
13_2_20cm_2_scaffold_112_3
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1893..2708
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003775D3E
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65025.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_2_20cm_2_scaffold_112_4
unknown

Not on your lists

comp(2672..2998)
DNA (327bp) protein (109aa)

This feature has no annotations

13_2_20cm_2_scaffold_112_trna_2
unknown

Not on your lists

comp(3268..3340)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_112_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3412..4023)
DNA (612bp) protein (204aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospor
Oligoribonuclease n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RB30_9ACTO
oligoribonuclease
13_2_20cm_2_scaffold_112_6
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4151..5260
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000368A9EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV96927.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-2
13_2_20cm_2_scaffold_112_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5187..6728)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VV68_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39590.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
13_2_20cm_2_scaffold_112_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6789..9323)
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034C3577
lysyl-tRNA synthetase
Lysyl-tRNA synthetase (Class II)-like protein {ECO:0000313|EMBL:ACZ85627.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Str
13_2_20cm_2_scaffold_112_9
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10434..11021)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036649D0
Membrane protein {ECO:0000313|EMBL:KJK57612.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
nuclear export factor GLE1
13_2_20cm_2_scaffold_112_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11183..12835)
DNA (1653bp) protein (551aa)
Copper resistance protein C n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXS7_9ACTO rbh
Copper resistance protein C {ECO:0000313|EMBL:CCH16374.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str.
copper resistance protein CopC rbh
13_2_20cm_2_scaffold_112_11
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12832..13518)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036D0808
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD45411.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
13_2_20cm_2_scaffold_112_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13575..14075
DNA (501bp) protein (167aa)
RNA polymerase sigma factor SigC n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037FDBCE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;
sigma-70 family RNA polymerase
13_2_20cm_2_scaffold_112_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14099..14557
DNA (459bp) protein (153aa)
DoxX family protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S5I9_MICSL
doxx family protein
Methylamine utilization MauE {ECO:0000313|EMBL:ADL44755.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (
13_2_20cm_2_scaffold_112_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14554..15261
DNA (708bp) protein (236aa)
DSBA oxidoreductase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F862_VERMA
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AEB43223.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-0
13_2_20cm_2_scaffold_112_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15430..16182
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXS3_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66811.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_2_20cm_2_scaffold_112_16
unknown

Not on your lists

comp(16155..16913)
DNA (759bp) protein (253aa)

This feature has no annotations

13_2_20cm_2_scaffold_112_17
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(16910..18424)
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C9755
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
13_2_20cm_2_scaffold_112_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18568..19239)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L886_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH20033.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_2_20cm_2_scaffold_112_19
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19220..19615)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RKB1_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70729.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_2_20cm_2_scaffold_112_20
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19619..20041)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037BD2F3
roadblock/lc7 family protein
Roadblock/lc7 family protein {ECO:0000313|EMBL:AEB46257.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strai
13_2_20cm_2_scaffold_112_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20083..22593)
DNA (2511bp) protein (837aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036011A0 rbh
histidine kinase HAMP region domain-containing protein rbh
13_2_20cm_2_scaffold_112_22
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22740..23426)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8Y4_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG89946.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993
13_2_20cm_2_scaffold_112_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24199..24444)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBR7_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86136.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_2_scaffold_112_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24441..25007)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBR7_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86136.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_2_scaffold_112_25
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25162..26127)
DNA (966bp) protein (322aa)
Cytochrome P450 n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L892_9ACTO
Cytochrome P450 {ECO:0000313|EMBL:CCH20039.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
cytochrome p450
13_2_20cm_2_scaffold_112_26
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26634..27110
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZJ4_ACTM4
Peroxiredoxin {ECO:0000313|EMBL:KHD78841.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
13_2_20cm_2_scaffold_112_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27269..28810
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00036A9E6F
UDP-N-acetylmuramate dehydrogenase {ECO:0000313|EMBL:ETK31373.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. AT
hypothetical protein
13_2_20cm_2_scaffold_112_28
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28810..29748
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY78_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKD07545.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy
NameRatio
Micromonosporales
53.52%
unknown
19.72%
Frankiales
8.45%
Streptosporangiales
7.04%
Glycomycetales
4.23%
Streptomycetales
2.82%
Pseudonocardiales
1.41%
Micrococcales
1.41%
Actinomycetales
1.41%
Micromonosporales: 0.5352112676056338unknown: 0.19718309859154928Frankiales: 0.08450704225352113Streptosporangiales: 0.07042253521126761Glycomycetales: 0.04225352112676056Streptomycetales: 0.028169014084507043Actinomycetales: 0.014084507042253521Micrococcales: 0.014084507042253521Pseudonocardiales: 0.014084507042253521MicromonosporalesunknownFrankiales