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13_2_20cm_2_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_173_1
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137..1762)
DNA (1626bp) protein (542aa)
hsdM; Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase) (EC:2.1.1.-) rbh
type I restriction endonuclease subunit M n=1 Tax=Salinispora pacifica RepID=UPI000381CE4B rbh
Type I restriction/modification system DNA methylase hsdM {ECO:0000313|EMBL:BAN32131.1}; TaxID=1229671 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacter
13_2_20cm_2_scaffold_173_2
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1765..3657)
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003737ADD rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR53469.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU1
hypothetical protein rbh
13_2_20cm_2_scaffold_173_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4169..4861)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003652907
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40716.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
13_2_20cm_2_scaffold_173_4
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4858..5247)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00036B84CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54414.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
13_2_20cm_2_scaffold_173_5
unknown

Not on your lists

comp(5244..5486)
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_2_scaffold_173_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5626..5736)
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:ADL45430.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
13_2_20cm_2_scaffold_173_7
unknown

Not on your lists

comp(6094..6351)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_2_scaffold_173_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6410..7177)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6JMZ4_9ACTO
putative multidrug ABC transporter permease protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ABC transporter
13_2_20cm_2_scaffold_173_9
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7174..8127)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6JQ76_9ACTO
putative multidrug ABC transporter ATP-binding protein Tax=RBG_16_Actinobacteria_67_15_curated
hypothetical protein
13_2_20cm_2_scaffold_173_10
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8524..8778)
DNA (255bp) protein (85aa)
Dehydrogenase n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RJJ8_PAEP6
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:ADM68832.1}; TaxID=349520 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain E681).;"
13_2_20cm_2_scaffold_173_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9000..9341
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATS1_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETK37446.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_2_20cm_2_scaffold_173_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9462..10406)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000381C1DE rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61752.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
alpha/beta hydrolase fold protein-3 domain-containing protein
13_2_20cm_2_scaffold_173_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10427..11143)
DNA (717bp) protein (239aa)
Lipolytic protein G-D-S-L family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7I2_CATAD
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACU72175.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (
13_2_20cm_2_scaffold_173_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11237..12412
DNA (1176bp) protein (392aa)
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15)
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:ACU72172.1}; EC=1.1.3.15 {ECO:0000313|EMBL:ACU72172.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora
(S)-2-hydroxy-acid oxidase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7H9_CATAD rbh
13_2_20cm_2_scaffold_173_15
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12436..13320
DNA (885bp) protein (295aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HXG1_9PSEU rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIE35419.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripot
GntR family transcriptional regulator
13_2_20cm_2_scaffold_173_16
unknown

Not on your lists

comp(14233..14520)
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_2_scaffold_173_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14895..15251
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003703DBE
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61736.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
AMP-dependent synthetase and ligase
13_2_20cm_2_scaffold_173_18
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15329..15592
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003719267
Uncharacterized protein {ECO:0000313|EMBL:EWM63133.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
phosphopantetheine-binding-protein
13_2_20cm_2_scaffold_173_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15631..15834
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6F3_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU72159.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
13_2_20cm_2_scaffold_173_20
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16578..16880
DNA (303bp) protein (101aa)
3-ketoacyl-ACP synthase n=1 Tax=Salinispora pacifica RepID=UPI0003779F0F
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61740.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
beta-ketoacyl synthase
13_2_20cm_2_scaffold_173_21
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16877..17464
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6F5_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU72161.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
13_2_20cm_2_scaffold_173_22
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17461..18582
DNA (1122bp) protein (374aa)
beta-ketoacyl synthase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000367B263
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ADL47251.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain
13_2_20cm_2_scaffold_173_23
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18646..19734
DNA (1089bp) protein (363aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27) rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ACU72163.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ACU72163.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Ca
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003823137
13_2_20cm_2_scaffold_173_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19791..20711
DNA (921bp) protein (307aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7H1_CATAD rbh
phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ACU72164.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain
13_2_20cm_2_scaffold_173_25
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20720..21520
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L502_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH18899.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_2_20cm_2_scaffold_173_26
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21536..22501
DNA (966bp) protein (322aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ACU72166.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ACU72166.1};; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporal
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003669385 rbh
13_2_20cm_2_scaffold_173_27
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22501..23472
DNA (972bp) protein (324aa)
transketolase n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036F2939 rbh
transketolase
Transketolase central region {ECO:0000313|EMBL:ACU72167.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (stra
13_2_20cm_2_scaffold_173_28
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23654..25021
DNA (1368bp) protein (456aa)
Condensation domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2G4_CATAD rbh
condensation domain-containing protein rbh
Condensation domain protein {ECO:0000313|EMBL:ACU69806.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strai
13_2_20cm_2_scaffold_173_29
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25045..25839
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7H5_CATAD rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU72168.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidi
13_2_20cm_2_scaffold_173_30
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25872..27503
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003629D14 rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACU72169.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphil
Displaying items 1-30 of 45 in total

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