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13_2_20cm_2_scaffold_3171

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3171_1
unknown

Not on your lists

comp(3..437)
DNA (435bp) protein (145aa)

This feature has no annotations

13_2_20cm_2_scaffold_3171_2
unknown

Not on your lists

comp(434..661)
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_2_scaffold_3171_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(675..866)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EED2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83044.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
13_2_20cm_2_scaffold_3171_4
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(871..2277)
DNA (1407bp) protein (469aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_16_Gammaproteobacteria_66_13_curated
atm:ANT_23280 aminotransferase (EC:2.6.1.-) id=1244355 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
aminotransferase (EC:2.6.1.-)
13_2_20cm_2_scaffold_3171_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2376..4058
DNA (1683bp) protein (561aa)
cyclic diguanylate phosphodiesterase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000371352A
putative phytochrome sensor protein
Putative phytochrome sensor protein {ECO:0000313|EMBL:ADB77376.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus
13_2_20cm_2_scaffold_3171_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(4176..5621)
DNA (1446bp) protein (482aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCW35449.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chth
Glutamine synthetase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ41_9BACT
13_2_20cm_2_scaffold_3171_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5838..7292
DNA (1455bp) protein (485aa)
Ammonium transporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F545_CONWI
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woes
13_2_20cm_2_scaffold_3171_8

Not on your lists

7289..7690
DNA (402bp) protein (134aa)
Nitrogen regulatory protein P-II n=2 Tax=Thermoanaerobacter RepID=D3T2T3_THEIA
Uncharacterized protein {ECO:0000313|EMBL:KKL07539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitrogen regulatory protein P-II
13_2_20cm_2_scaffold_3171_9
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7918..8265)
DNA (348bp) protein (116aa)
thioredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E511
trxa3; Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
13_2_20cm_2_scaffold_3171_10

Not on your lists

8411..9877
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AJL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD68190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_2_scaffold_3171_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9850..10311
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9K4_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40497.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_2_20cm_2_scaffold_3171_12
unknown

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comp(10491..11048)
DNA (558bp) protein (186aa)

This feature has no annotations

13_2_20cm_2_scaffold_3171_13
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11045..11740)
DNA (696bp) protein (232aa)
Cytochrome b/b6 domain protein n=4 Tax=Paenibacillus RepID=D3E7M1_GEOS4
cytochrome b6
Cytochrome b6 {ECO:0000313|EMBL:ETT43499.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
13_2_20cm_2_scaffold_3171_14
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11741..12292)
DNA (552bp) protein (184aa)
Rieske 2Fe-2S iron-sulfur protein, putative n=1 Tax=Bacillus sp. SG-1 RepID=A6CL41_9BACI
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGN32955.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
oxidoreductase
13_2_20cm_2_scaffold_3171_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12305..13291)
DNA (987bp) protein (329aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=GWC2_RIF_CHLX_73_18_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=3440871 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
13_2_20cm_2_scaffold_3171_16
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

13326..14801
DNA (1476bp) protein (492aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6R8_METSW
putative polysaccharide biosynthesis protein Tax=RBG_13_Chloroflexi_54_9_curated
polysaccharide biosynthesis protein
13_2_20cm_2_scaffold_3171_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14768..15658
DNA (891bp) protein (297aa)
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QU83_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETK36270.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_2_20cm_2_scaffold_3171_18

Not on your lists

comp(15474..16544)
DNA (1071bp) protein (357aa)
DNA polymerase IV, devoid of proofreading,damage-inducible protein P {ECO:0000313|EMBL:CBH99700.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH99700.1};; TaxID=410659 species="unclassified sequences; metagenomes
DNA polymerase IV, devoid of proofreading,damage-inducible protein P n=1 Tax=mine drainage metagenome RepID=E6PXP1_9ZZZZ
DNA polymerase IV
13_2_20cm_2_scaffold_3171_19
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

16589..17335
DNA (747bp) protein (249aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7200681 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
nucleotidyl transferase Tax=CG_Arma_02
13_2_20cm_2_scaffold_3171_20
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

17332..17781
DNA (450bp) protein (150aa)
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_68_14_curated
SpsL id=2211342 bin=GWB2_Geobacter-like_52_12 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein
13_2_20cm_2_scaffold_3171_21
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17778..18800
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; R
dTDP-glucose 4,6-dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTQ0_ROSS1
dTDP-glucose 4,6-dehydratase
13_2_20cm_2_scaffold_3171_22
unknown

Not on your lists

comp(18816..19739)
DNA (924bp) protein (308aa)

This feature has no annotations

13_2_20cm_2_scaffold_3171_23
unknown

Not on your lists

comp(19766..20719)
DNA (954bp) protein (318aa)

This feature has no annotations

13_2_20cm_2_scaffold_3171_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20721..21491)
DNA (771bp) protein (257aa)
Glycosyl transferase family 2 n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I598_MYCRH
glycosyl transferase family protein Tax=RBG_16_RIF_CHLX_72_14_curated
glycosyl transferase
13_2_20cm_2_scaffold_3171_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21455..22477)
DNA (1023bp) protein (341aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I596_MYCRH rbh
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_CHLX_72_14_curated
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_3171_26
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22632..23264)
DNA (633bp) protein (211aa)
putative UDP-glucose/GDP-mannose dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_CHLX_72_14_curated
Putative UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H263_ACTM4
putative UDP-glucose/GDP-mannose dehydrogenase
13_2_20cm_2_scaffold_3171_27
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23638..24819
DNA (1182bp) protein (394aa)
Glycosyl transferase group 1 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IB13_9CHLR
Glycosyl transferase group 1 {ECO:0000313|EMBL:EFO81659.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="O
group 1 glycosyl transferase
13_2_20cm_2_scaffold_3171_28
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

24849..25379
DNA (531bp) protein (177aa)
putative UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_16_Chloroflexi_58_14_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0K2_ANATU
Displaying 28 items

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