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13_2_20cm_2_scaffold_115

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_115_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..476)
DNA (474bp) protein (158aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ABE63079.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ABE63079.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL18_NITHX
13_2_20cm_2_scaffold_115_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(866..2137)
DNA (1272bp) protein (424aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B52A34
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EJW09496.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sour
cyclopropane-fatty-acyl-phospholipid synthase
13_2_20cm_2_scaffold_115_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3063..3692)
DNA (630bp) protein (210aa)
50S ribosomal protein L9 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFB1_9RHOB
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp
50S ribosomal protein L9
13_2_20cm_2_scaffold_115_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3723..4634)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LFU2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11893.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
13_2_20cm_2_scaffold_115_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4779..5024)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Rhodovulum sp. PH10 RepID=J5PN26_9RHOB
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
30S ribosomal protein S18
13_2_20cm_2_scaffold_115_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5030..5515)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037EA1B2
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
30S ribosomal protein S6
13_2_20cm_2_scaffold_115_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5824..6768
DNA (945bp) protein (315aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX89_RHOP2
malonyl CoA-acyl carrier protein transacylase
13_2_20cm_2_scaffold_115_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6785..7522
DNA (738bp) protein (246aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLW6_AFIFE
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKS28525.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
13_2_20cm_2_scaffold_115_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7755..7994
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PN18_9RHOB
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteri
acpP; acyl carrier protein
13_2_20cm_2_scaffold_115_10
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8104..9369
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z9N6_9BRAD
3-oxoacyl-(acyl-carrier-protein) synthase II
13_2_20cm_2_scaffold_115_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9793..11004
DNA (1212bp) protein (404aa)
Aminodeoxychorismate lyase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215S9_RHOPB
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABD87857.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomo
13_2_20cm_2_scaffold_115_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11100..11987
DNA (888bp) protein (296aa)
Protein YicC n=1 Tax=Rhodovulum sp. PH10 RepID=J5PN12_9RHOB rbh
Protein YicC {ECO:0000313|EMBL:EJW11882.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
13_2_20cm_2_scaffold_115_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12046..12651
DNA (606bp) protein (202aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EIA5_BRASB
13_2_20cm_2_scaffold_115_14
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12720..13562)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I571_9BRAD
ksgA; dimethyladenosine transferase
13_2_20cm_2_scaffold_115_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13559..14587)
DNA (1029bp) protein (343aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMK5_9BRAD
13_2_20cm_2_scaffold_115_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14600..15526)
DNA (927bp) protein (309aa)
SurA-like protein n=1 Tax=Afipia birgiae RepID=UPI0002E8AE1B
Uncharacterized protein {ECO:0000313|EMBL:EKS39609.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
13_2_20cm_2_scaffold_115_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15636..18104)
DNA (2469bp) protein (823aa)
Organic solvent tolerance protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J738_9RHOB rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rh
organic solvent tolerance protein
13_2_20cm_2_scaffold_115_18
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..19192)
DNA (1089bp) protein (363aa)
Permease n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z9N0_9BRAD
permease
Permease {ECO:0000313|EMBL:BAM90152.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S5
13_2_20cm_2_scaffold_115_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19189..20364)
DNA (1176bp) protein (392aa)
Permease YjgP/YjgQ n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ55_9BRAD
Permease YjgP/YjgQ {ECO:0000313|EMBL:EAQ34730.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
putative permease
13_2_20cm_2_scaffold_115_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20769..22265
DNA (1497bp) protein (499aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMA
Probable cytosol aminopeptidase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=AMPA_RHOPS
13_2_20cm_2_scaffold_115_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..22773
DNA (453bp) protein (151aa)
DNA polymerase III subunit chi n=2 Tax=Oligotropha carboxidovorans RepID=B6JGL7_OLICO
DNA polymerase III subunit chi {ECO:0000313|EMBL:ETR74918.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.
putative DNA polymerase III, chi subunit
13_2_20cm_2_scaffold_115_22
unknown

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22900..23091
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_2_scaffold_115_23
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..23639
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8Y7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR74919.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_2_20cm_2_scaffold_115_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23818..25011
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000368111E
Uncharacterized protein {ECO:0000313|EMBL:KFG71070.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
integrase family protein
Displaying 24 items

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