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13_2_20cm_2_scaffold_1220

Search features with annotation key words

Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1220_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_2
unknown

Not on your lists

comp(131..265)
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_3
unknown

Not on your lists

comp(300..536)
DNA (237bp) protein (79aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_4
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

856..1455
DNA (600bp) protein (200aa)
Putative catabolite gene activator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NSG3_9RHOB
Putative catabolite gene activator {ECO:0000313|EMBL:EAV44492.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
13_2_20cm_2_scaffold_1220_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1789..2562
DNA (774bp) protein (258aa)
hydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI000373EBBE
Hydrolase {ECO:0000313|EMBL:KGD91990.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium
hydrolase
13_2_20cm_2_scaffold_1220_6
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2639..3034)
DNA (396bp) protein (132aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSC4_9BURK
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ETF02220.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirens
pcaC; 4-carboxymuconolactone decarboxylase
13_2_20cm_2_scaffold_1220_7
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3301..3831)
DNA (531bp) protein (177aa)
glutamine amidotransferase n=1 Tax=Salinispora pacifica RepID=UPI000380CBC5
PfpI family intracellular peptidase
Glutamine amidotransferase {ECO:0000313|EMBL:KHD89612.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovib
13_2_20cm_2_scaffold_1220_8
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3828..4478)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036109C3
cytochrome b561 Tax=CG_Mariprof_05
cytochrome b561
13_2_20cm_2_scaffold_1220_9
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4510..5184)
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family id=1367065 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TetR family transcriptional regulator Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
transcriptional regulator, TetR family
13_2_20cm_2_scaffold_1220_10
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5677..6882
DNA (1206bp) protein (402aa)
Salicylate 1-monooxygenase (NahW) n=1 Tax=Burkholderia sp. SJ98 RepID=K8RAF4_9BURK
flavin containing amine oxidoreductase family protein
Flavin containing amine oxidoreductase family protein {ECO:0000313|EMBL:AJZ56931.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
13_2_20cm_2_scaffold_1220_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6942..7547
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK47_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP66977.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
13_2_20cm_2_scaffold_1220_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7779..9515
DNA (1737bp) protein (579aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
His Kinase A (Phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4ILU2_RHIML
His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
13_2_20cm_2_scaffold_1220_13
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9528..9659
DNA (132bp) protein (44aa)
Putative endonuclease containing a URI domain n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YMC2_9BRAD
excinuclease ABC subunit C
Putative endonuclease containing a URI domain {ECO:0000313|EMBL:EHR04125.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
13_2_20cm_2_scaffold_1220_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9939..10904)
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UE3_CUPPJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_2_20cm_2_scaffold_1220_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11151..12038)
DNA (888bp) protein (296aa)
AraC family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037F98E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY55083.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
13_2_20cm_2_scaffold_1220_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13130
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUD8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM27580.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="M
13_2_20cm_2_scaffold_1220_17
unknown

Not on your lists

13328..13477
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13488..15122
DNA (1635bp) protein (545aa)
CyaI3 adenylate/guanylate cyclase {ECO:0000313|EMBL:AAK65524.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AAK65524.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
adenylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000361E151
SAM domain (Sterile alpha motif)/Adenylate and Guanylate cyclase catalytic domain protein
13_2_20cm_2_scaffold_1220_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15122..16204
DNA (1083bp) protein (361aa)
cyaI3; CyaI3 adenylate/guanylate cyclase (EC:4.6.1.1)
UPI0003D0500E related cluster n=1 Tax=unknown RepID=UPI0003D0500E
Adenylate cyclase {ECO:0000313|EMBL:ESZ20377.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C0
13_2_20cm_2_scaffold_1220_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..16648
DNA (291bp) protein (97aa)
Putative ATPase n=1 Tax=Rhizobium sp. CF142 RepID=J2L4E4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJC56958.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
transcriptional regulator
13_2_20cm_2_scaffold_1220_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17246..18427)
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04790.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
UbiD family decarboxylases id=2064952 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
13_2_20cm_2_scaffold_1220_22
unknown

Not on your lists

comp(18992..19081)
DNA (90bp) protein (30aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_23
unknown

Not on your lists

comp(19075..19245)
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_24
unknown

Not on your lists

comp(19847..20056)
DNA (210bp) protein (70aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_25
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..22324)
DNA (2118bp) protein (706aa)
cvaB; colicin V secretion (EC:3.4.22.-)
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QR38_9BRAD rbh
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain {ECO:0000313|EMBL:EIG62244.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
13_2_20cm_2_scaffold_1220_26
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22329..23576)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003681782
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIG62245.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
HlyD family secretion protein
13_2_20cm_2_scaffold_1220_27
unknown

Not on your lists

comp(24171..24341)
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_2_scaffold_1220_28
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24614..24994
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037F8187
photosystem reaction center subunit H
Photosystem reaction center subunit H {ECO:0000313|EMBL:AHB49600.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp
13_2_20cm_2_scaffold_1220_29
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25317..25781
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002F7CE74
sensor histidine kinase with a response regulator receiver domain
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84819.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea
13_2_20cm_2_scaffold_1220_30
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25831..27096)
DNA (1266bp) protein (422aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSQ3_PUSST rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AEC19645.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.
Displaying items 1-30 of 51 in total

View Taxonomy