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13_2_20cm_2_scaffold_916

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_916_trna_1
unknown

Not on your lists

comp(56..128)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_916_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..1048)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N854_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE27491.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
13_2_20cm_2_scaffold_916_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1499..2542
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003688EBF rbh
immunogenic protein; K07080 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
immunogenic protein
13_2_20cm_2_scaffold_916_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2683..4698
DNA (2016bp) protein (672aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRK1_THISH rbh
TRAP transporter 4TM/12TM fusion protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
TRAP transporter 4TM/12TM fusion protein
13_2_20cm_2_scaffold_916_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4840..6336)
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PTN3_9RHOB rbh
13_2_20cm_2_scaffold_916_5
unknown

Not on your lists

comp(6736..7689)
DNA (954bp) protein (318aa)

This feature has no annotations

13_2_20cm_2_scaffold_916_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7805..9568)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHV0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83310.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
sulfatase
13_2_20cm_2_scaffold_916_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9788..11488)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003641FA9
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43932.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_2_20cm_2_scaffold_916_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11718..12740)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F01513 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR79219.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
ABC transporter substrate-binding protein
13_2_20cm_2_scaffold_916_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12830..13618)
DNA (789bp) protein (263aa)
Hydroxymethylpyrimidine ABC transporter, transmembrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J5PU11_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:ETR79217.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease
13_2_20cm_2_scaffold_916_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13779..14579)
DNA (801bp) protein (267aa)
ABC-type nitrate/sulfonate/bicarbonate transport protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LKK7_9RHOB
ABC-type nitrate/sulfonate/bicarbonate transport protein {ECO:0000313|EMBL:EJW13228.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovu
mannosyltransferase
13_2_20cm_2_scaffold_916_11
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14611..15480)
DNA (870bp) protein (290aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=GWA2_Desulfovibrionales_65_9_curated
ketol-acid reductoisomerase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037FBFF7
ketol-acid reductoisomerase
13_2_20cm_2_scaffold_916_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15575..16111)
DNA (537bp) protein (179aa)
Acetolactate synthase small subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFM9_9RHOB
Acetolactate synthase small subunit {ECO:0000313|EMBL:EJW12561.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
acetolactate synthase small subunit
13_2_20cm_2_scaffold_916_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16377..16775)
DNA (399bp) protein (133aa)
Acetolactate synthase large subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6JAJ6_9RHOB
Acetolactate synthase large subunit {ECO:0000313|EMBL:EJW12560.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
acetolactate synthase large subunit
13_2_20cm_2_scaffold_916_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16772..18016)
DNA (1245bp) protein (415aa)
Acetolactate synthase {ECO:0000313|EMBL:KFC67047.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KFC67047.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bo
acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Microvirga sp. WSM3557 RepID=U5FCG2_9RHIZ
13_2_20cm_2_scaffold_916_15
bacterium YEK0313, Bacteria

Not on your lists

18419..19168
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IAX5_AZOC5
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000313|EMBL:CEJ15212.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
13_2_20cm_2_scaffold_916_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19096..20022)
DNA (927bp) protein (309aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_0018
tRNA dimethylallyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MIAA_NITHX
13_2_20cm_2_scaffold_916_17
bacterium YEK0313, Bacteria

Not on your lists

20026..20952
DNA (927bp) protein (309aa)
Phosphoserine phosphatase SerB n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CY76_9BRAD
Phosphoserine phosphatase {ECO:0000313|EMBL:CEJ09778.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
phosphoserine phosphatase
13_2_20cm_2_scaffold_916_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21001..22482)
DNA (1482bp) protein (494aa)
Serine protease DO-like n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G41_BRADU
DO-like serine protease
Serine protease DO-like {ECO:0000313|EMBL:BAC51771.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
13_2_20cm_2_scaffold_916_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22637..22822)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MFC7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20841.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
unnamed protein product
13_2_20cm_2_scaffold_916_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22860..23777)
DNA (918bp) protein (306aa)
Protein HflC n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PL1_RHOP5
HflC protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodop
13_2_20cm_2_scaffold_916_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23774..24004)
DNA (231bp) protein (77aa)
HflK protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQR6_9BRAD
HflK protein {ECO:0000313|EMBL:EGP06444.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
HflK protein
13_2_20cm_2_scaffold_916_22
unknown

Not on your lists

comp(24101..24748)
DNA (648bp) protein (216aa)

This feature has no annotations

13_2_20cm_2_scaffold_916_23

Not on your lists

comp(24901..25464)
DNA (564bp) protein (188aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZX0_9BRAD
13_2_20cm_2_scaffold_916_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25461..26255)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QEZ9_RHOPT
thyA; thymidylate synthase
13_2_20cm_2_scaffold_916_25
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26350..26853)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SJT3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD94460.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_2_20cm_2_scaffold_916_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27449..28954)
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211X6_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88810.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_2_20cm_2_scaffold_916_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28973..29620)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P502_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35789.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
13_2_20cm_2_scaffold_916_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30591..31160
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMI0_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43470.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
13_2_20cm_2_scaffold_916_29
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31854..32138
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S655_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD89682.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
Displaying items 1-30 of 39 in total

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