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13_2_20cm_2_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_99_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236..1420
DNA (1185bp) protein (395aa)
lytic transglycosylase n=1 Tax=Afipia birgiae RepID=UPI0003117BC1
Uncharacterized protein {ECO:0000313|EMBL:EGP07397.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
lytic murein transglycosylase
13_2_20cm_2_scaffold_99_2
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1467..3305
DNA (1839bp) protein (613aa)
Possible thiamine pyrophosphate-requiring enzyme n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKX8_MOBAS
Possible thiamine pyrophosphate-requiring enzyme {ECO:0000313|EMBL:EAS50395.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" sou
ilvG; acetolactate synthase II
13_2_20cm_2_scaffold_99_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3366..4355)
DNA (990bp) protein (330aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55)
4,5-dihydroxyphthalate decarboxylase {ECO:0000313|EMBL:AEF88687.1}; EC=4.1.1.55 {ECO:0000313|EMBL:AEF88687.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Massilia niastensis RepID=UPI000363C9DF rbh
13_2_20cm_2_scaffold_99_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4410..4595)
DNA (186bp) protein (62aa)
GIY-YIG nuclease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000368884B
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48860.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_2_20cm_2_scaffold_99_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4775..6616)
DNA (1842bp) protein (614aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
single-stranded DNA exonuclease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037E8A87
Single-stranded DNA exonuclease {ECO:0000313|EMBL:KJC35473.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
13_2_20cm_2_scaffold_99_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6634..7086)
DNA (453bp) protein (151aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QHU7_RHOPT
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACF01294.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
13_2_20cm_2_scaffold_99_7
unknown

Not on your lists

comp(7271..7780)
DNA (510bp) protein (170aa)

This feature has no annotations

13_2_20cm_2_scaffold_99_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8862)
DNA (1020bp) protein (340aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNV7_9BRAD
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;
13_2_20cm_2_scaffold_99_9
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..10265)
DNA (1326bp) protein (442aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
hom; homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000372E1C1
13_2_20cm_2_scaffold_99_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10292..11509)
DNA (1218bp) protein (406aa)
Aspartate aminotransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PGN8_9RHOB rbh
Aspartate aminotransferase {ECO:0000313|EMBL:EJW10562.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
aminotransferase
13_2_20cm_2_scaffold_99_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11571..11897)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000313E102
Uncharacterized protein {ECO:0000313|EMBL:EKS39748.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
13_2_20cm_2_scaffold_99_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12186..13862
DNA (1677bp) protein (559aa)
Poly(R)-hydroxyalkanoic acid synthase, class I subfamily n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4E3_POLGS rbh
poly(R)-hydroxyalkanoic acid synthase
Poly(R)-hydroxyalkanoic acid synthase, class I subfamily {ECO:0000313|EMBL:ADZ71085.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (
13_2_20cm_2_scaffold_99_13
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13931..14836
DNA (906bp) protein (302aa)
ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035F939A
ABC transporter amino-acid-binding protein; K10001 glutamate/aspartate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
family 3 extracellular solute-binding protein
13_2_20cm_2_scaffold_99_14
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14931..15683
DNA (753bp) protein (251aa)
Amino acid ABC transporter permease n=2 Tax=Rhodospirillum rubrum RepID=G2TCH3_RHORU
polar amino acid ABC transporter inner membrane subunit; K10003 glutamate/aspartate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
amino acid ABC transporter permease
13_2_20cm_2_scaffold_99_15
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15949..16224
DNA (276bp) protein (92aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UPE5_METS4
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACA18886.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobact
13_2_20cm_2_scaffold_99_16
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16233..16961
DNA (729bp) protein (243aa)
Glutamate/aspartate ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CCD87206.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCD87206.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Glutamate/aspartate ABC transporter (ATP-binding protein) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RZ29_9BRAD
glnQ1; glutamine transport ATP-binding protein
13_2_20cm_2_scaffold_99_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17022..18077)
DNA (1056bp) protein (352aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodovulum sp. PH10 RepID=J6U9U8_9RHOB
13_2_20cm_2_scaffold_99_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..18742)
DNA (639bp) protein (213aa)
Negative transcriptional regulator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137M2_RHOPS
negative transcriptional regulator
Negative transcriptional regulator {ECO:0000313|EMBL:ABE39717.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodo
13_2_20cm_2_scaffold_99_19
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19055..19210)
DNA (156bp) protein (52aa)
Beta-lactamase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213R3_RHOPB
Beta-lactamase {ECO:0000313|EMBL:KJC53859.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849
beta-lactamase-like protein
13_2_20cm_2_scaffold_99_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19171..19956)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNJ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07410.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
twin-arginine translocation pathway signal
13_2_20cm_2_scaffold_99_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20113..22368
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF20_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF02524.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_2_20cm_2_scaffold_99_22
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22428..22964)
DNA (537bp) protein (179aa)
Putative membrane protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8L9_9RHOB
Putative membrane protein {ECO:0000313|EMBL:EJW09838.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. P
hypothetical protein
13_2_20cm_2_scaffold_99_23
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23295..25376
DNA (2082bp) protein (694aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLZ1_RHOPX rbh
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:KIF65932.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
13_2_20cm_2_scaffold_99_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

25713..27389
DNA (1677bp) protein (559aa)
Putative hydrolase transmembrane protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP81_9GAMM
putative hydrolase transmembrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
streptogramin lyase
13_2_20cm_2_scaffold_99_25
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27421..28413)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036D5153
bug; ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
extra-cytoplasmic solute receptor family protein 124
13_2_20cm_2_scaffold_99_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28650..30050
DNA (1401bp) protein (467aa)
Amino acid/peptide transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH03_NITHX rbh
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ABE64494.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ha
13_2_20cm_2_scaffold_99_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30047..30751
DNA (705bp) protein (235aa)
Pyridoxal-5'-phosphate phosphatase , Alphaproteobacterial type n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAX8_9RHOB
Pyridoxal-5'-phosphate phosphatase , Alphaproteobacterial type {ECO:0000313|EMBL:EJW10246.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; R
pyrimidine 5'-nucleotidase
13_2_20cm_2_scaffold_99_28
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30870..31715
DNA (846bp) protein (282aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZ05_9RHOB
13_2_20cm_2_scaffold_99_29
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31769..32089
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEI5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09706.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
13_2_20cm_2_scaffold_99_30
unknown

Not on your lists

32285..32968
DNA (684bp) protein (228aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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