ggKbase home page

13_2_20cm_2_scaffold_1425

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1425_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1..402
DNA (402bp) protein (134aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=204669 spe
Trigger factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TIG_KORVE
trigger factor
13_2_20cm_2_scaffold_1425_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

460..1068
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=204669 spe
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CLPP_KORVE rbh
ATP-dependent Clp protease proteolytic subunit
13_2_20cm_2_scaffold_1425_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1177..2454
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRD9_KORVE
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
13_2_20cm_2_scaffold_1425_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2528..4933
DNA (2406bp) protein (802aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRE0_KORVE
Lon-A peptidase
13_2_20cm_2_scaffold_1425_5
unknown

Not on your lists

5016..5243
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5247..5909
DNA (663bp) protein (221aa)
Probable GTP-binding protein EngB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ENGB_KORVE
small GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_2_scaffold_1425_7
unknown

Not on your lists

6254..6577
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6672..7628
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368CDC7 rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADW67294.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola
13_2_20cm_2_scaffold_1425_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7729..8433
DNA (705bp) protein (235aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM06_KORVE
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF42094.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_2_20cm_2_scaffold_1425_10
unknown

Not on your lists

comp(8316..9131)
DNA (816bp) protein (272aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_11
unknown

Not on your lists

comp(9192..9500)
DNA (309bp) protein (103aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9801..12026
DNA (2226bp) protein (742aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
N-acetylmuramyl-L-alanine amidase n=2 Tax=Geobacter sulfurreducens RepID=D7AJQ2_GEOSK
N-acetylmuramyl-L-alanine amidase
13_2_20cm_2_scaffold_1425_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12044..14170)
DNA (2127bp) protein (709aa)
Peptidase S9, prolyl oligopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUN5_KORVE
peptidase S9, prolyl oligopeptidase
Peptidase S9, prolyl oligopeptidase {ECO:0000313|EMBL:ABF39415.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_2_20cm_2_scaffold_1425_14
unknown

Not on your lists

comp(14190..14792)
DNA (603bp) protein (201aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(14811..15935)
DNA (1125bp) protein (375aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_2_20cm_2_scaffold_1425_16
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15994..17514)
DNA (1521bp) protein (507aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDN0_RALP1
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AKC70939.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;
13_2_20cm_2_scaffold_1425_17
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17699..18547)
DNA (849bp) protein (283aa)
Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VGW1_9CYAN
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AKC70939.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;
13_2_20cm_2_scaffold_1425_18
unknown

Not on your lists

18672..19058
DNA (387bp) protein (129aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_19
unknown

Not on your lists

19145..19645
DNA (501bp) protein (167aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_20
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19648..19971)
DNA (324bp) protein (108aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_16_Deltaproteobacteria_48_10_curated
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISX2_KORVE
UDP-N-acetylglucosamine 2-epimerase
13_2_20cm_2_scaffold_1425_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20138..20731)
DNA (594bp) protein (198aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISX2_KORVE
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETX03974.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp
UDP-N-acetylglucosamine 2-epimerase
13_2_20cm_2_scaffold_1425_22
Clavispora lusitaniae, Clavispora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(20860..22788)
DNA (1929bp) protein (643aa)
Predicted protein n=1 Tax=Clavispora lusitaniae (strain ATCC 42720) RepID=C4XYJ5_CLAL4
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EEQ36895.1}; TaxID=306902 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora.;" sou
13_2_20cm_2_scaffold_1425_23
unknown

Not on your lists

22910..23623
DNA (714bp) protein (238aa)

This feature has no annotations

13_2_20cm_2_scaffold_1425_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

24164..24457
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X91_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85724.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
Displaying 24 items

View Taxonomy