ggKbase home page

14_0903_02_30cm_scaffold_275

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_02_30cm_scaffold_275_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(244..1248)
DNA (1005bp) protein (335aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_02_30cm_scaffold_275_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1241..2158)
DNA (918bp) protein (306aa)
Peptidase S58 DmpA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G670_CHLAD
peptidase S58 DmpA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_275_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2195..2809
DNA (615bp) protein (205aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_275_5
unknown

Not on your lists

3103..3285
DNA (183bp) protein (61aa)

This feature has no annotations

14_0903_02_30cm_scaffold_275_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3260..4603)
DNA (1344bp) protein (448aa)
Fis family transcriptional regulator id=14430105 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_275_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4596..5516)
DNA (921bp) protein (307aa)
Diacylglycerol kinase catalytic region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF9_ROSCS
diacylglycerol kinase catalytic subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_275_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5517..9911)
DNA (4395bp) protein (1465aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9912..12017)
DNA (2106bp) protein (702aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12064..13668
DNA (1605bp) protein (535aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative ABC transporter substrate binding protein
14_0903_02_30cm_scaffold_275_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13649..14569
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative ABC transporter permease protein
14_0903_02_30cm_scaffold_275_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14535..16040
DNA (1506bp) protein (502aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3N6_TERSS
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_275_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16101..17123)
DNA (1023bp) protein (341aa)
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_275_14
unknown

Not on your lists

17169..18047
DNA (879bp) protein (293aa)

This feature has no annotations

14_0903_02_30cm_scaffold_275_15
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18144..18680
DNA (537bp) protein (179aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDE6_9FIRM
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EKP94696.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
hypothetical protein
14_0903_02_30cm_scaffold_275_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18674..19780
DNA (1107bp) protein (369aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_275_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20056..20949
DNA (894bp) protein (298aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21043..22539
DNA (1497bp) protein (499aa)
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
glcD; glycolate oxidase subunit GlcD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22536..23744
DNA (1209bp) protein (403aa)
Glycolate oxidase subunit n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NCA8_GLOVI
glcE; glycolate oxidase subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23741..25003
DNA (1263bp) protein (421aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_02_30cm_scaffold_275_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25000..25875
DNA (876bp) protein (292aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X502_PSEDE
Oxygen-independent coproporphyrinogen III oxidase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_275_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25872..26543
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3P8_GEOUR
HAD family hydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_275_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26540..27613
DNA (1074bp) protein (358aa)
folate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6716F
putative aminomethyl transferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_275_24
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

27610..28635
DNA (1026bp) protein (342aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5DFB6
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADV63902.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
14_0903_02_30cm_scaffold_275_25
unknown

Not on your lists

comp(28658..28885)
DNA (228bp) protein (76aa)

This feature has no annotations

14_0903_02_30cm_scaffold_275_26
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28975..31923
DNA (2949bp) protein (983aa)
hypothetical protein id=16786537 bin=RBG_16_Aminicenantes_63_16_plus species=Alistipes sp. CAG:268 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
glycosyl hydrolases 38-like
Tax=RBG_16_Planctomycetes_64_12_curated
14_0903_02_30cm_scaffold_275_27
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32118..34598
DNA (2481bp) protein (827aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase id=2990033 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
14_0903_02_30cm_scaffold_275_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

34617..36110
DNA (1494bp) protein (498aa)
Magnesium chelatase subunit ChlI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X5_GEMAT
chlI; magnesium chelatase subunit ChlI
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_275_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

36143..37069
DNA (927bp) protein (309aa)
Band 7 protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXP5_9BACT
slr1768; hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_275_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

37141..37704
DNA (564bp) protein (188aa)
Cytidylate kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD61_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 36 in total

View Taxonomy