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14_0903_12_20cm_scaffold_4591

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_4591_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..701)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039ED7EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03461.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
14_0903_12_20cm_scaffold_4591_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

808..2592
DNA (1785bp) protein (595aa)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLV5_9BACT
FtsH peptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_0903_12_20cm_scaffold_4591_3
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2599..3513
DNA (915bp) protein (305aa)
LpqO protein n=5 Tax=Alphaproteobacteria RepID=M2S8T7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EQB19135.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
14_0903_12_20cm_scaffold_4591_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3545..4312)
DNA (768bp) protein (256aa)
id=12556705 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_12_20cm_scaffold_4591_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4438..6387)
DNA (1950bp) protein (650aa)
aminopeptidase N id=12556703 bin=CNBR_ACIDO species=Rudanella lutea genus=Rudanella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
peptidase M1 membrane alanine aminopeptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_12_20cm_scaffold_4591_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6483..7376)
DNA (894bp) protein (298aa)
Methyltransferase FkbM n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC5_NOVAD
methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:ABD25198.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
14_0903_12_20cm_scaffold_4591_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7404..8402
DNA (999bp) protein (333aa)
Dihydrodipicolinate reductase id=3364370 bin=GWF2_Ignavibacteria_35_20 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
dihydrodipicolinate reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0903_12_20cm_scaffold_4591_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8513..8824
DNA (312bp) protein (104aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Z1_SOLUE
PadR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_0903_12_20cm_scaffold_4591_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8908..11598
DNA (2691bp) protein (897aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020A9_SOLUE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ84756.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_12_20cm_scaffold_4591_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

11595..12086
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDD6_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
14_0903_12_20cm_scaffold_4591_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12188..13402)
DNA (1215bp) protein (405aa)
molybdenum cofactor biosynthesis protein MoeA id=12557430 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
molybdenum cofactor synthesis domain protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0903_12_20cm_scaffold_4591_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13546..14085)
DNA (540bp) protein (180aa)
Molybdenum cofactor biosynthesis protein B id=2732488 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaB; molybdenum cofactor biosynthesis protein B
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_0903_12_20cm_scaffold_4591_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14615..15277
DNA (663bp) protein (221aa)
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49] id=14624600 bin=bin5_DeltaP species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RNA-directed DNA polymerase (EC:2.7.7.49)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0903_12_20cm_scaffold_4591_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15668..16846
DNA (1179bp) protein (393aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Retron-type reverse transcriptase id=1884135 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Retron-type reverse transcriptase {ECO:0000313|EMBL:KAJ49241.1}; Flags: Fragment;; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
14_0903_12_20cm_scaffold_4591_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

16984..17196
DNA (213bp) protein (71aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
hypothetical protein, partial n=1 Tax=Nocardiopsis chromatogenes RepID=UPI00036CE369
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 15 items

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