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14_0903_12_20cm_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_306_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2..733)
DNA (732bp) protein (244aa)
Fis family transcriptional regulator id=12556814 bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
14_0903_12_20cm_scaffold_306_2
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

976..1587
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AF720
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN54884.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
14_0903_12_20cm_scaffold_306_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1584..2843
DNA (1260bp) protein (420aa)
Putative aldo/keto reductase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HW02_AZOC5
aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:BAF90376.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
14_0903_12_20cm_scaffold_306_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2840..4147
DNA (1308bp) protein (436aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH rbh
Outer membrane efflux protein {ECO:0000313|EMBL:AHG91808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative outer membrane macrolide efflux protein rbh
14_0903_12_20cm_scaffold_306_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

4158..7340
DNA (3183bp) protein (1061aa)
Gll0876 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM91_GLOVI
AcrB/AcrD/AcrF family multidrug efflux protein
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
14_0903_12_20cm_scaffold_306_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7337..8578
DNA (1242bp) protein (414aa)
Gll0875 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM92_GLOVI
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG91806.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
HlyD family multidrug efflux protein
14_0903_12_20cm_scaffold_306_7
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8641..8994
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000365509C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA63633.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
14_0903_12_20cm_scaffold_306_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8991..9554
DNA (564bp) protein (188aa)
40-residue YVTN family beta-propeller repeat protein n=2 Tax=Ralstonia pickettii RepID=B2UKB5_RALPJ
Surface antigen protein {ECO:0000313|EMBL:CDY76348.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR42309.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
14_0903_12_20cm_scaffold_306_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9551..10396
DNA (846bp) protein (282aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T9_STAND
40-residue YVTN family beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ADH88313.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
14_0903_12_20cm_scaffold_306_10
unknown

Not on your lists

10445..10993
DNA (549bp) protein (183aa)

This feature has no annotations

14_0903_12_20cm_scaffold_306_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11271..12098
DNA (828bp) protein (276aa)
Secreted protease C {ECO:0000313|EMBL:KFC70162.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC70162.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036AE406
hypothetical protein
14_0903_12_20cm_scaffold_306_12
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12150..13229)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S9YUK1_STRA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF68449.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
14_0903_12_20cm_scaffold_306_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13367..13897
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88730.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
RNA polymerase sigma factor
14_0903_12_20cm_scaffold_306_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13899..14672
DNA (774bp) protein (258aa)
Putative transmembrane anti-sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG29_9CHLR
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFH88731.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
prtR; putative transmembrane anti-sigma factor
14_0903_12_20cm_scaffold_306_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14678..17263)
DNA (2586bp) protein (862aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029X8_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ82148.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0903_12_20cm_scaffold_306_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17430..19745
DNA (2316bp) protein (772aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMI0_ANADE
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:ABC80011.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
14_0903_12_20cm_scaffold_306_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19749..20360)
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_12_20cm_scaffold_306_18
unknown

Not on your lists

comp(20424..20612)
DNA (189bp) protein (63aa)

This feature has no annotations

14_0903_12_20cm_scaffold_306_19
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20758..21420)
DNA (663bp) protein (221aa)
Fumarate and nitrate reduction regulatory protein {ECO:0000313|EMBL:EJC65266.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
14_0903_12_20cm_scaffold_306_20
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21542..23464)
DNA (1923bp) protein (641aa)
PAS/PAC sensor hybrid histidine kinase id=1758732 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
PAS domain S-box
Tax=GWB2_Desulfobacterales_56_26_curated
14_0903_12_20cm_scaffold_306_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(23587..24846)
DNA (1260bp) protein (420aa)
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
Tax=CSP1_5_NC10
14_0903_12_20cm_scaffold_306_trna_1
unknown

Not on your lists

24988..25060
DNA (73bp)
transferRNA Glu
14_0903_12_20cm_scaffold_306_trna_2
unknown

Not on your lists

25120..25191
DNA (72bp)
transferRNA Glu
14_0903_12_20cm_scaffold_306_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25572..25985)
DNA (414bp) protein (138aa)
HEPN domain-containing protein id=24498218 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
HEPN domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0903_12_20cm_scaffold_306_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25975..26328)
DNA (354bp) protein (118aa)
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain-containing protein region id=24498217 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_13_Deltaproteobacteria_58_19_curated
14_0903_12_20cm_scaffold_306_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26661..28139)
DNA (1479bp) protein (493aa)
Alpha-tubulin suppressor and related RCC1 domain-containing proteins n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_41L09 RepID=E7C7U8_9BACT
chromosome condensation regulator RCC1
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_306_25
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28387..29064
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UK2_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70551.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
14_0903_12_20cm_scaffold_306_26
unknown

Not on your lists

29102..29323
DNA (222bp) protein (74aa)

This feature has no annotations

14_0903_12_20cm_scaffold_306_27
unknown

Not on your lists

29555..30067
DNA (513bp) protein (171aa)

This feature has no annotations

14_0903_12_20cm_scaffold_306_28
unknown

Not on your lists

30857..31174
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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