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14_0903_12_20cm_scaffold_325

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_325_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..385)
DNA (384bp) protein (128aa)
Negative regulator of genetic competence ClpC/MecB n=1 Tax=Lactobacillus jensenii SJ-7A-US RepID=D0DLX5_9LACO
AAA ATPase central domain protein {ECO:0000313|EMBL:AHG91368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
14_0903_12_20cm_scaffold_325_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(389..1159)
DNA (771bp) protein (257aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1149..1868)
DNA (720bp) protein (240aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B408_DESCC
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2022..2837
DNA (816bp) protein (272aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
phosphomethylpyrimidine kinase n=1 Tax=Meiothermus timidus RepID=UPI000377A00C
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2838..3542
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DI36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35110.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
hypothetical protein
14_0903_12_20cm_scaffold_325_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3529..4353)
DNA (825bp) protein (275aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_325_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4382..5794)
DNA (1413bp) protein (471aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VY0_SOLUE
Na+ dependent nucleoside transporter
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_325_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5795..7024)
DNA (1230bp) protein (410aa)
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PB84_9DELT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_325_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7045..7857
DNA (813bp) protein (271aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7854..9575
DNA (1722bp) protein (574aa)
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_325_11
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

9678..10823
DNA (1146bp) protein (382aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Paenibacillus RepID=F5LDY5_9BACL
glycosyltransferase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
14_0903_12_20cm_scaffold_325_12
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10823..11248
DNA (426bp) protein (142aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A669_GEMAT
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEE97392.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
14_0903_12_20cm_scaffold_325_13
unknown

Not on your lists

11259..11441
DNA (183bp) protein (61aa)

This feature has no annotations

14_0903_12_20cm_scaffold_325_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11456..12196
DNA (741bp) protein (247aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12206..13327)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ54_9BACT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBK43291.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
14_0903_12_20cm_scaffold_325_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13535..14548
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037A3B35
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14568..15614
DNA (1047bp) protein (349aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein id=3880880 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter periplasmic phosphate binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15593..16564
DNA (972bp) protein (324aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMC5_KORVE
phosphate ABC transporter permease
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_325_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16561..17409
DNA (849bp) protein (283aa)
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
phosphate ABC transporter, permease protein PstA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17393..18169
DNA (777bp) protein (259aa)
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4M1_GEOUR
phosphate ABC transporter ATP-binding protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
14_0903_12_20cm_scaffold_325_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18166..18999
DNA (834bp) protein (278aa)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CE57_9RHOB
phosphate ABC transporter ATPase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_325_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18996..19706
DNA (711bp) protein (237aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB06_GEMAT
phoU; phosphate transport system regulatory protein PhoU
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_325_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19684..20442)
DNA (759bp) protein (253aa)
rhomboid family protein id=12557265 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rhomboid family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_325_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20649..22577
DNA (1929bp) protein (643aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_12_20cm_scaffold_325_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22602..24170
DNA (1569bp) protein (523aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_12_20cm_scaffold_325_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24174..25631)
DNA (1458bp) protein (486aa)
Putative outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU1_GEMAT
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH40668.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_12_20cm_scaffold_325_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25636..27036)
DNA (1401bp) protein (467aa)
Hypothetical membrane protein id=4504315 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40669.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_12_20cm_scaffold_325_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27040..28383)
DNA (1344bp) protein (448aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU3_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH40670.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_12_20cm_scaffold_325_29
unknown

Not on your lists

comp(28465..29115)
DNA (651bp) protein (217aa)

This feature has no annotations

14_0903_12_20cm_scaffold_325_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29295..30167
DNA (873bp) protein (291aa)
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 30 items

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