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14_0903_12_20cm_scaffold_996

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_996_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..866)
DNA (864bp) protein (288aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024A6_SOLUE
14_0903_12_20cm_scaffold_996_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(889..3273)
DNA (2385bp) protein (795aa)
beta-glucosidase (EC:3.2.1.21) rbh
Beta-glucosidase {ECO:0000313|EMBL:AEN72956.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AEN72956.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Beta-glucosidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG56_RHOMR rbh
14_0903_12_20cm_scaffold_996_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3270..4361)
DNA (1092bp) protein (364aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glycoside hydrolase family 10 n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GAM6_SPITZ
glycoside hydrolase family protein
14_0903_12_20cm_scaffold_996_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4358..6274)
DNA (1917bp) protein (639aa)
carbohydrate-binding protein SusD n=1 Tax=Spirosoma spitsbergense RepID=UPI00037A0C41
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG93134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RagB/SusD domain-containing protein
14_0903_12_20cm_scaffold_996_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6306..8990)
DNA (2685bp) protein (895aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CFM7_SPHS2
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93133.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor plug
14_0903_12_20cm_scaffold_996_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8987..9334)
DNA (348bp) protein (116aa)
TonB-dependent receptor plug domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ87_SALRD
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG93829.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor domain-containing protein
14_0903_12_20cm_scaffold_996_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9439..11631)
DNA (2193bp) protein (731aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Alpha-glucuronidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL3_RHOM4 rbh
alpha-glucuronidase rbh
14_0903_12_20cm_scaffold_996_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11643..12887)
DNA (1245bp) protein (415aa)
Mandelate racemase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZF1_SORCE
mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:AGP38602.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
14_0903_12_20cm_scaffold_996_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12906..14102)
DNA (1197bp) protein (399aa)
Putative hexuronate transporter n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UNX4_XANC8
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG87912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
exuT; hexuronate transporter
14_0903_12_20cm_scaffold_996_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14131..14955)
DNA (825bp) protein (275aa)
D-mannonate oxidoreductase (EC:1.1.1.131)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZW7_RUBXD
D-mannonate oxidoreductase {ECO:0000313|EMBL:AHG92973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_12_20cm_scaffold_996_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14958..16163)
DNA (1206bp) protein (402aa)
Lipolytic protein G-D-S-L family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG26_RHOM4 rbh
G-D-S-L family lipolytic protein rbh
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACY49515.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
14_0903_12_20cm_scaffold_996_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(16179..18314)
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSI0_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03525.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
14_0903_12_20cm_scaffold_996_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18474..21044
DNA (2571bp) protein (857aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_0903_12_20cm_scaffold_996_14
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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21100..22935
DNA (1836bp) protein (612aa)
putative hydrolase; K06978 id=16796937 bin=RBG_16_Aminicenantes_66_30 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
putative hydrolase
Tax=RBG_16_Aminicenantes_63_16_curated
14_0903_12_20cm_scaffold_996_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22937..24109)
DNA (1173bp) protein (391aa)
Peptidase M20D family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A988_GEMAT
Amidohydrolase {ECO:0000313|EMBL:AHG93497.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M20D family protein
14_0903_12_20cm_scaffold_996_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24106..25224)
DNA (1119bp) protein (373aa)
menC; O-succinylbenzoate synthase (EC:4.2.1.113)
O-succinylbenzoate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A995_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_996_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25224..26126)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A994_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_996_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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26193..27101
DNA (909bp) protein (303aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ABF42836.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0903_12_20cm_scaffold_996_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27062..27751
DNA (690bp) protein (230aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ABF42836.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0903_12_20cm_scaffold_996_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27798..30830
DNA (3033bp) protein (1011aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_0903_12_20cm_scaffold_996_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30875..32182
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA5_GEMAT rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91469.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein rbh
14_0903_12_20cm_scaffold_996_22
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

32200..33726
DNA (1527bp) protein (509aa)
Beta-lactamase family protein id=4605543 bin=GWC2_Ignavibacteria_56_12 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
beta-lactamase
Tax=GWA2_Ignavibacteria_54_16_curated
14_0903_12_20cm_scaffold_996_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

33729..34952
DNA (1224bp) protein (408aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B13_SOLUE
Dihydroorotase {ECO:0000313|EMBL:AHG88110.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

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